Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1487 ATGAGGATCCGGAAAAGGCCGGTTCTTTTCCCGTCGTCGCTCTCGCCTCTGTCAGATCCACACCTGATCAGCCGGTCGCCGGTGGTGGTGCAACTAAACGAGGCTGCTTCCACCGCAGCGAAACATTCTCCTTCTTCTTCTTCTTCTTCAGCAGTGCTCCATCGCCATGCTGCTTCGTGGAGCTTGGATCGTTGCCAGCCATCCAATCAGTCTCTCCCTTCGATCGGGAAGCCAAGCAACGGCTGGGATTGTCCCTCCGTCATCGGTGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGAGGAGGTTGTTGGAAGGGAAGAAAGTGGAGAAGACTCCAGAGAGAAGGGTAATCATACCAGGAAAGGACGCAACTTGGCTTTGGAAACTCTAGCTGGGGTGGTGTCGCCGTTAAGCCCTTCTTCTACTCAAGATAGATGGTACGAGGAAGAGAAAGCTATTCCGCTGAAGAAAAGGAGAGGGGCACTCGAGGAGAATAATGCTGCTGCTACTCATAGCAAGAAGATGAAGGCGAAGATGAAGACGAAGATGAACAAGAAGTGTTCCTCTCGCAACGAGGATAGCACGGAAGAGGAAGATGAAGAAGAGAAGGGAGAAGAAACAAAAGTGGATGATGTAAACGTGAATGTGAGTGTGAGTAAGAAGAGGGTAAGGGGTAGTGCACTGATGGAAGGTTCTAGGTGCAGTCGTGTGAACGGGAGGGGGTGGAGGTGTTGTCAACAAACGCTGGTTGGTTACTCCCTGTGTGAGCATCACTTGGGGAAGGGAAGACTCAGAAGCATGACAAGTGTTAGAAGCCGTTCCATTGCATCAACTGCACCAAAGAAGGTGCACATACACCACCTTTCTTCTTCTTCTTCTTCTTCTCTTGAGAAGCAAAACACGAGTGTTGCTGAGCCCTTTGGGGAGGAGGAGGAGGAGAAGAAGCCAGAGATAATCACGAAGAAGAGGATGAAGCTTGGCGTGGTAAAAGCGCGTTCCATAAGCAGTTTGCTAGGACAAACAAACACCCAGATTACTGCTGTAGCTCATGAGAATAGCAAGTAA 1077 0.5023 MRIRKRPVLFPSSLSPLSDPHLISRSPVVVQLNEAASTAAKHSPSSSSSSAVLHRHAASWSLDRCQPSNQSLPSIGKPSNGWDCPSVIGESGAHRQHNKQDPLEEVVGREESGEDSREKGNHTRKGRNLALETLAGVVSPLSPSSTQDRWYEEEKAIPLKKRRGALEENNAAATHSKKMKAKMKTKMNKKCSSRNEDSTEEEDEEEKGEETKVDDVNVNVSVSKKRVRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAPKKVHIHHLSSSSSSSLEKQNTSVAEPFGEEEEEKKPEIITKKRMKLGVVKARSISSLLGQTNTQITAVAHENSK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1487 358 MobiDBLite consensus disorder prediction 62 77 - -
Pvu1g1487 358 PANTHER - 47 356 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu1g1487 358 MobiDBLite consensus disorder prediction 288 306 - -
Pvu1g1487 358 MobiDBLite consensus disorder prediction 280 325 - -
Pvu1g1487 358 MobiDBLite consensus disorder prediction 163 213 - -
Pvu1g1487 358 MobiDBLite consensus disorder prediction 94 126 - -
Pvu1g1487 358 MobiDBLite consensus disorder prediction 308 325 - -
Pvu1g1487 358 PANTHER OS02G0773600 PROTEIN 47 356 - -
Pvu1g1487 358 ProSiteProfiles WRC domain profile. 232 276 IPR014977 -
Pvu1g1487 358 MobiDBLite consensus disorder prediction 34 55 - -
Pvu1g1487 358 Pfam WRC 234 274 IPR014977 -
Pvu1g1487 358 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g1487 358 MobiDBLite consensus disorder prediction 34 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1487 Pvu-Chr1 39235349 39238122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1487 - - gmx:100810559 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1487 1 39235349 39238122 Pvu1g1487 1 39235349 39238122 ECH
Pvu1g1487 1 39235349 39238122 Pvu7g2684 7 49858688 49861593 PCT