Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1486 ATGCTGCAATATATAGTATATACACACACAGACACAAAGATGGACAGCTTCAATTGTTCAAGTACTTTCACCAAAACAGAAATGGGATCACCACACAAGGACCCAAATGTTTTCCACTTTACCCATCCACATCCTTTGGAATGCACCACCTCACCCTCCACACCAAATATTCTACACTGCTTTGGATGCAAGCTAAAACTTAAGCCTGCTGAGGACTATTACCACTGCAAAACATGTGCTTTCTCTCTTCACCATGTCTGCTACAATATGCCCTTAATCACAAACCACCCTTCACATCCAACCCACCCTCTAAACCTCCTTCTTATACCTTCCACCAAACCCACTCCCAACTGTGCGGCATGTGGCCACCATGTCACGGGCTTTTCCTACCACTGTGCTCAATGCACCATCTTCTTTCATGCCTTCTGTCTTGCACTCCCTCTGTCCCTCGCAATCACATACCATCCCCACAAAATCAAGCTTCAGTTTTCACCACCCTATGACTTCTTCTGTGACTTGTGCAACAAGCCCAGTAATCATAATAACCGGTGGCTGTATAGGTGCAACATGTGTGAATTCGACACACATATAGCTTGTGCCGTTGAAAACCTAGATCCTCGTTTGTTTCATATCCCATCTTTCCCTCAGTCAAGCCCTCTGTTAAGGCAACTTACTAGTCATCAAGTGGAACACAAAAAAATTAGTGCAAGTGTAGGTGATAGTTTCAAAGGGTATGAGTATGGGATCATGAGTTTGGTGGCACAACAAATTGGAGGGGGGACCAGGGAAAATTTTGATAGTACAACCGCTGGATGGGACAAGAGATTGTATAGTAGTCCAAGGAAAAAGCATAACAGAGCTGAGAGTGAGAAGATGAAGAATGTTGAACTTGGATTCCAAGAAAAAGCACTAAGCCCTGCTGAAGTTTTATCAGAACTAGAAGGAAGAACCCCACTTCGGGATAAATGGACTCCACTTTCTGATCACTCGGACGCACCGTTTAGTAACCAATACAGTGACTCGTGTTTTTCAATAGATTTGGCAAAGTCATATTCATCCCATGCACGTAGAAGTCAGGTACAAAAAGAAGGTGGTAAAGACCAGATAACACGAGCTGCAACTATGCCAGAGACACCTAACGTTGGAAGCAATTGTGCACAACGTGAAGAACCATTCGTTGTAGTTAATAATACGCTGAACGCAGCTATTTTCATCAAAGAAGGACGAACTAGTGATGCTGGGAAATCAAGCCAGAGAGTGATGATGAAAAATCGTAACGAAAGGCACGCTAAAAGTTCTGTTCAAGACGAAACAATTGCTATATCGGAGACAGGAAGAACCAGCTGTTCTTGTTGGAAGAAATTCCTAAACTTCTGCCCTTTAGCATAG 1389 0.4334 MLQYIVYTHTDTKMDSFNCSSTFTKTEMGSPHKDPNVFHFTHPHPLECTTSPSTPNILHCFGCKLKLKPAEDYYHCKTCAFSLHHVCYNMPLITNHPSHPTHPLNLLLIPSTKPTPNCAACGHHVTGFSYHCAQCTIFFHAFCLALPLSLAITYHPHKIKLQFSPPYDFFCDLCNKPSNHNNRWLYRCNMCEFDTHIACAVENLDPRLFHIPSFPQSSPLLRQLTSHQVEHKKISASVGDSFKGYEYGIMSLVAQQIGGGTRENFDSTTAGWDKRLYSSPRKKHNRAESEKMKNVELGFQEKALSPAEVLSELEGRTPLRDKWTPLSDHSDAPFSNQYSDSCFSIDLAKSYSSHARRSQVQKEGGKDQITRAATMPETPNVGSNCAQREEPFVVVNNTLNAAIFIKEGRTSDAGKSSQRVMMKNRNERHAKSSVQDETIAISETGRTSCSCWKKFLNFCPLA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1486 462 Pfam C1 domain 154 200 IPR004146 -
Pvu1g1486 462 Pfam C1 domain 97 143 IPR004146 -
Pvu1g1486 462 Pfam C1 domain 40 87 IPR004146 -
Pvu1g1486 462 SUPERFAMILY Cysteine-rich domain 154 201 IPR046349 -
Pvu1g1486 462 PANTHER - 37 355 - -
Pvu1g1486 462 SUPERFAMILY Cysteine-rich domain 71 157 IPR046349 -
Pvu1g1486 462 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 37 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1486 Pvu-Chr1 39224459 39226873 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1486 - - pvu:PHAVU_001G142900g 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1486 1 39224459 39226873 Pvu1g1486 1 39224459 39226873 ECH