Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1483 ATGAACAGCACCATCTTCAAAGCTTCAGCCAGCAATAATCTCCATTCCTCTCTCAGGGCCGCACTCTTCCATTCAACCCCTCCATTGCAACGTAAACGCCGCAATTTTTGGGAACCCAGAGGCAACAACCATAAGTCCAGAAGGTTTAAACGGATGCAAGCAAAACATAGAGTAATGAACAGTATCAATGATTATGCAGAATCCCTGTTTCAGAGCTGGAAGCAAGGTATTGATCAGGACGAGATGCCATCAAGTCAAGATACCTCACGGTTTCATAAAAAACAATATTTTGATGGGGGCTCTGGGAGGTACAGGAATGGCAAGCAAGGATCAAATCATCGGTACAGAAGAGATCCTTTGTTTTGTGAAGATGATTTTGAAGTCGAAACCATTTTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGAGGAAAATTCTCAGTGGGGGAGGTCTGGACGTTTTTCTAATTTTGGGAAATCATGGAATTGGAGACATCAAAGTGAAAATGATTATGACTCTTCATCTGAGTCAGATAGTTCTGACTTAGATTTAGGTCCGGATAGATTAGTCCTTGGATTGACTGCTTCTGGTCCTCTGAAACTTGAAGATGTAAAAAATGCGTACCGGGCCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGCTCTTGCAAGGCTATAGCAGAAGAGAAGTTCAAGCTTTGCAGTGCAGCTTATCAATCTTTATGTGATAAGCTGGCCTTGGATTGA 768 0.4258 MNSTIFKASASNNLHSSLRAALFHSTPPLQRKRRNFWEPRGNNHKSRRFKRMQAKHRVMNSINDYAESLFQSWKQGIDQDEMPSSQDTSRFHKKQYFDGGSGRYRNGKQGSNHRYRRDPLFCEDDFEVETIFRSAFGGNRFFYWSFINEENSQWGRSGRFSNFGKSWNWRHQSENDYDSSSESDSSDLDLGPDRLVLGLTASGPLKLEDVKNAYRACALKWHPDRHQGSCKAIAEEKFKLCSAAYQSLCDKLALD* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1483 255 Gene3D DnaJ domain 198 250 IPR036869 -
Pvu1g1483 255 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 4 254 - -
Pvu1g1483 255 ProSiteProfiles dnaJ domain profile. 192 253 IPR001623 -
Pvu1g1483 255 SUPERFAMILY Chaperone J-domain 155 250 IPR036869 -
Pvu1g1483 255 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 4 254 - -
Pvu1g1483 255 MobiDBLite consensus disorder prediction 78 111 - -
Pvu1g1483 255 MobiDBLite consensus disorder prediction 85 99 - -
Pvu1g1483 255 PRINTS DnaJ domain signature 214 229 IPR001623 -
Pvu1g1483 255 PRINTS DnaJ domain signature 233 253 IPR001623 -
Pvu1g1483 255 Pfam DnaJ domain 197 251 IPR001623 -
Pvu1g1483 255 CDD DnaJ 196 250 IPR001623 -
Pvu1g1483 255 SMART dnaj_3 196 253 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1483 Pvu-Chr1 39192195 39195490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1483 - - gmx:100807880 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1483 1 39192195 39195490 Pvu1g1483 1 39192195 39195490 ECH
Pvu1g1483 1 39192195 39195490 Pvu7g2679 7 49810152 49810959 PCT