Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1477 ATGCAAGGAGGAAAGAAAGCAGCAGAATGCGCGAAGGAAACGGCTTCAAACATGGGTGCTTCTGCCAAAGCTGGCATGGAGAAGACCAAGGCCAATGTCGAAGAGAAGGCAGAAAGGTTGACAACACGTGATCCGTTGGAAAAGGAAATGGCTACCCAAAAGAAGGATGTAAAGGTCAACCAGGCTGAGCTCGACAAGCTGGCGGCGCGTGCGCATAACGCCGCGTCCAAGGAGGCGGCCACCTACCCCACCACCGGGGAGCATGGTAATCACACAGAGCTCCACCAGACGTCGGCGATGCCAGGTCACGGAACTGGGCAGCCCACGGGCCACGTGACCAATCGAGGCCTGGGTGGGAACATCTAG 366 0.5738 MQGGKKAAECAKETASNMGASAKAGMEKTKANVEEKAERLTTRDPLEKEMATQKKDVKVNQAELDKLAARAHNAASKEAATYPTTGEHGNHTELHQTSAMPGHGTGQPTGHVTNRGLGGNI* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1477 121 Coils Coil 23 43 - -
Pvu1g1477 121 MobiDBLite consensus disorder prediction 1 121 - -
Pvu1g1477 121 MobiDBLite consensus disorder prediction 28 65 - -
Pvu1g1477 121 MobiDBLite consensus disorder prediction 78 121 - -
Pvu1g1477 121 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 115 IPR005513 GO:0009793
Pvu1g1477 121 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 46 1 115 - -
Pvu1g1477 121 Pfam Late embryogenesis abundant (LEA) group 1 10 78 IPR005513 GO:0009793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1477 Pvu-Chr1 39117752 39118628 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1477 - - gmx:547828 167.162