Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1472 ATGTTTAGCCCTTCACATCTCAAAACCTTGTACCCTCTTCAAGTCTTCTCAGTAAAACCATCGTCCCCATCTTCAACCATAAGCTCCATGAAGCTGAAAAGAATCGTCCACACCCTCATAGTCTCTCACTTGTGCCGAATCATTCGTGCACTCTCCAAAGTCAAAGCTGTCGTGGTTGAGATTCTTAAGGACAATTCGAGCATCCACTTCTCTAACAAAAAGCATATCAACAACAGACGCAAGAAGATCATCTTAGGCTCCTTCAGGCTTCACTATAACTGGTGCTCCTCCAAATCCTCGCATGTGTTACCGGTTCCAGAACCGGTTTTCGAAGGGTTGTCTGCAGCCGCGAGTTCGGGGGAGCCACAAGATGAAGATTGCCCCTACCTTCGGTGGCTTGAGCAGAAGAAGGTTGAAGTCGAAGGTGGCGAGAAGAAGGGTGCAAGTGCAGGTGCAAATAATGAGCATGAAATGAATGAGATTGATGTGCTGGCAGAAATGTTCATTGCCAATTGCCACGAGAAGTTCAGGTTGGAGAAGCAAGAATCTGATAGGAGGTTCCAAGAAATGCTGGCTAGAAGCATGTAA 588 0.466 MFSPSHLKTLYPLQVFSVKPSSPSSTISSMKLKRIVHTLIVSHLCRIIRALSKVKAVVVEILKDNSSIHFSNKKHINNRRKKIILGSFRLHYNWCSSKSSHVLPVPEPVFEGLSAAASSGEPQDEDCPYLRWLEQKKVEVEGGEKKGASAGANNEHEMNEIDVLAEMFIANCHEKFRLEKQESDRRFQEMLARSM* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1472 195 PANTHER EMB|CAB67623.1-RELATED 3 195 - -
Pvu1g1472 195 PANTHER DUF761 DOMAIN PROTEIN 3 195 - -
Pvu1g1472 195 Pfam Cotton fibre expressed protein 159 193 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1472 Pvu-Chr1 39007317 39007904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1472 - - var:108323472 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1472 1 39007317 39007904 Pvu1g1472 1 39007317 39007904 ECH
Pvu1g1472 1 39007317 39007904 Pvu7g2666 7 49692288 49693285 PCT