Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1462 ATGACGGAACCAACGGAGCCATCCACCTCATCTTCATTGGCGAGGGACCCATGCACTGTGATTCACCCAAGGCGCGAGCCCTTCGAGCACGGTCTCTTGCCAATCCCACGACTTATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTACAGTTATCCTCAAACCAGCGAGTCGACTCGGTGGCCATCTCCGACTCACTTCAGATCTCCATTGAGCACGCCAAGCTCGTCCTCGATACCCTCGCCTCGATTCTGCACTCCGACTCTGAACCTCTCACCGTCGCAAAGTTCGGCGAAATCGATTCCGTTGGCGTCGACGTGCATGATCTGGTATTGTTCCTCTACATTCAATCCTACAAGAGAATCCTCCCGCGGACGCACAAGGACTCCGTCGCCGTCGCCGATGTCTGGCCTTCTACTTCTGCCTTCGATGGCTTCTTGTCCGCTCTCTCGCCGCTTCAGCTGGTACGCAGCAACAGTCGGCGGTTTATGCCTTCTCAGGCTGATATAGAGGCACATCAGTTGTCGTATCTGCAAAAACACTTGGCTAACATAATGTCTCTTCTAGCAGAGCCTGTAGAGGGAGAAGGCGAAGAGTCTCTGGTTTTAACAATGGATAGATTCGAGCATCTCGGGTTTCTATTTCAGTTTGGTGATAAGGGATTGGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCCAACTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAATATAGTGGCTACTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAAAATGGCCCATCTAGTGCCTCTGATCAGGATGTTGCCATGACTGATGCAAGCACTGTGTCAGTTAAGGTCTCAACAAGTACTAGAGGTGCAAGTTTCATTGAAGGGATCTCTAAATCATCATATACGAAGCTTGCATCTGACATTAAAGGTTCTTCTGTCAAGGTTCTTAATTGCCACGAGTCTTCCATCTACATCCTAGCACCATTGAGATATGCCACTGTTTATGGATGTTCAGATGCAACAATAGTTATTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAACGTGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTATTTTCTTTTTGGGGGTGAATCAGCAACCACTTATGCTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACTTTTTACTCCCAACTGGAGGAGCATATGAATGAAGTTGGAATTGTTCCTACAGTGAACCGATGGAATGAACCTCTCGCATTTGGAATGGTTGATCCACATGATTCATTGTCTCACCCAGCAGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACCCAGGTGGACCCAGATCAGTTCACTAATTTTGTGATTCCGAGCTGGCTTGGAGGAGACTCTACTGGGACTACAGAAGGCAATCCATTCTCGCTACCAGATGCTTACATGGCATCTCAGCATAAAAATCACAAAAATTTAGGGGAGTTAAGGCAACTCATACGGGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCACTCCATGTGTACTTCAAGGACTGGTTATATGCTTCTGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1698 0.467 MTEPTEPSTSSSLARDPCTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLQLSSNQRVDSVAISDSLQISIEHAKLVLDTLASILHSDSEPLTVAKFGEIDSVGVDVHDLVLFLYIQSYKRILPRTHKDSVAVADVWPSTSAFDGFLSALSPLQLVRSNSRRFMPSQADIEAHQLSYLQKHLANIMSLLAEPVEGEGEESLVLTMDRFEHLGFLFQFGDKGLEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVATLEYISERTSSKENGPSSASDQDVAMTDASTVSVKVSTSTRGASFIEGISKSSYTKLASDIKGSSVKVLNCHESSIYILAPLRYATVYGCSDATIVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECIFFLGVNQQPLMLGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWNEPLAFGMVDPHDSLSHPAGVSDVQAESATQVDPDQFTNFVIPSWLGGDSTGTTEGNPFSLPDAYMASQHKNHKNLGELRQLIREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1462 565 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Pvu1g1462 565 PANTHER UNCHARACTERIZED 15 565 IPR039589 -
Pvu1g1462 565 PANTHER BNAC04G02540D PROTEIN 15 565 - -
Pvu1g1462 565 SMART carp 337 374 IPR006599 -
Pvu1g1462 565 SMART carp 375 409 IPR006599 -
Pvu1g1462 565 Gene3D - 309 483 IPR016098 -
Pvu1g1462 565 ProSiteProfiles C-CAP/cofactor C-like domain profile. 282 435 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1462 Pvu-Chr1 38884311 38892315 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1462 K16810 - gmx:100780410 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1462 1 38884311 38892315 Pvu1g1462 1 38884311 38892315 ECH