Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1460 ATGACGGAACCGACGGAGCCATGCACGTCTTCTTCATTGGCGAGGGACTCTAGCACCGTGATTCACCCAAGGCGGGAGCCCTTTGAGCACGGCCTCCTGCCAATCCCACGCCTCATCTTCTCCGACCCCGCGCAAACCCTAATTTCGTTGAAGCGGAAGCTTCTACAGTTATCCTCCAACCAGCGAGTCGACTCGGCGGCCATCTCCGAGGCACTGCAGATCTCCATTGAGCATGCCAGACTCGTCATCGATACGCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTTGTCGCTGCAAAGCTCGACGAAGCCGATTCCGTCGGCGTCGACGTCCATGATCTGGTACTATTCCTGTACATTCAATCCTACAAGAGGCTCCTCCCGCGGACGCACAAGGACTCCGCTGCCGTCGCCGATGTCTGGCCTTCCACTTCCGCCTTCGATGGCTACTTGTCCGCCCTCTCGCCGCTTCAGCTTGTGCGCAGCAACAGTAGGCGGTTTATGCCATCGCAGACTGATGAAGAGGCGCATCAGTTGTCATTTCTGCAAAAACACTTGGCTAACATTCTGTCTCTTCTAGCAGAGCCTGTGGATGGAGAAGGCGTAGAACTTCTGGTTTTAACTATGGAAAGATTTGAGCGCCTTGGGTTTCTAATTCAGTTTGGTGACAAGGGATCTGAAGGAAATTTTTTCAGTCAATTTTCTCCCTTTTTTGCAAATTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGTCGCTCAAGTTCAAGATTGGCTTCTACAGAATATAGCTGCTGCTTTGGAATATATTTCTGAACGGACTTCTTCTAAGGAAAATGGGCCAGCTAGTCCTTCTGATCACGATGTTGCTATGACTGATGCATGCGGTGCCTCAGTTAATAAGGTTTCAACAAGTACTAGAGGTGCAAGTTTCATTGAAGGGATTTCCAAATCGTCATATATGAAGCATGCACCTGACATTAAAGGTTCCACTGTTAAGGTTCTAAATTGCCACGAGTCTGCCATATACATCTTAGCACCTTTGAGATATGCTACTGTCTATGGGTGTTCAGATGCAACAATAGTTCTAGGAGCAGTAGGCAAGGCTGTCAGAGTAGAACATTGTGAAAGAGTTCATGTAATCGTAGCAGCAAAACATATTTGTATTGCTAATTGTCGGGAATGTGTTTTCTTTTTGGGAGTGAACCGGCAACCTCTTATTGTTGGTGATAACCATAAACTGCAGGTGGCTCCCTATAATACTTTTTATTCCCAGTTGGAGGAGCATATGAATGAAGTTGGAATTGTGCCCACAGTTAACCGATGGGATGAGCCTCTAGCATTGGGCATGGTTGATCCGCATGATTCATTGTCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCTGCTATGCAGGTGGACCCAGATCAGTTCACTAATTTTGTGATTCCAAACTGGTTTGGAGGAGAGTCCACTGGGTCTACAAAAAGCAACCCATTCACGTTACCAGATGCTTATATGGCATCTCAGAATAAAAATCAAAAAAATTTAGGGGAGATAAGGCAGCTCTTACGAGAAGCACCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCTCTCCATGTCTACTTCAGGGACTGGTTATATGCTTCCGGAAACATTCGTCAGCTTTATTTTCTACAAGGCGATTGA 1701 0.4727 MTEPTEPCTSSSLARDSSTVIHPRREPFEHGLLPIPRLIFSDPAQTLISLKRKLLQLSSNQRVDSAAISEALQISIEHARLVIDTLASILHSDSEPLVAAKLDEADSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQTDEEAHQLSFLQKHLANILSLLAEPVDGEGVELLVLTMERFERLGFLIQFGDKGSEGNFFSQFSPFFANSDPDMPAVPVPVAQVQDWLLQNIAAALEYISERTSSKENGPASPSDHDVAMTDACGASVNKVSTSTRGASFIEGISKSSYMKHAPDIKGSTVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKHICIANCRECVFFLGVNRQPLIVGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESAMQVDPDQFTNFVIPNWFGGESTGSTKSNPFTLPDAYMASQNKNQKNLGEIRQLLREAPLEESRKRELSSALHVYFRDWLYASGNIRQLYFLQGD* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1460 566 SMART carp 338 375 IPR006599 -
Pvu1g1460 566 SMART carp 376 410 IPR006599 -
Pvu1g1460 566 PANTHER UNCHARACTERIZED 14 566 IPR039589 -
Pvu1g1460 566 Gene3D - 310 480 IPR016098 -
Pvu1g1460 566 ProSiteProfiles C-CAP/cofactor C-like domain profile. 285 436 IPR017901 -
Pvu1g1460 566 PANTHER BNAC04G02540D PROTEIN 14 566 - -
Pvu1g1460 566 Pfam Tubulin binding cofactor C 331 445 IPR012945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1460 Pvu-Chr1 38867054 38878900 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1460 K16810 - gmx:100800780 1018.07