Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1454 ATGCGCTACACGCTCCTCTCCGGCGGCAAGAGGATTCGTCCGGTGCTCTGCATCGCCGCGTGCGAGCTCGTCGGAGGCCTCGATTACGCCGCCCTACCCGCCGCATGCGCCGTCGAGATGGTTCACGCCATGTCGCTCATCCACGACGACTTGCCCTGCATTGACAACGATGACCTCCGGCGAGGGAAGCCGACGTGCCACAAGGTCTTCGGCGAGAACGTGGCGATCCTCGCCGGCGATGCGCTGCAGGCGCGCGCGTTCGAGCACGTGGCGGCGTCGACGAAGAACGTGTGTCCCACCCGCGTGGTTCGCGCGATAGTGGAATTGGCGAAATCAATGGCCGCGGAAGGCGTTGCGGGGGGACAAGTGATGGATGTGAGTTCGGAAGGGTTGTCGAGTGAGGAGGGTTTGGAGAGAGTGGAATTGATTCACCTTCACAAATCGGCGGCGTTGTTGGAAGGTGCGGTTGTGTTGGGGGCAATAATGGGGGGTGGGTCGGACGAGGAAGTTGAGAGATTAAGGATGTTTGGTCGTTGCGTTGGGTTGATGGGTCAGGTTGTGGATGATATTCTTGATGTTACTCAATCGACGGAGAAATTGAGGAAGACTGCGGGGAAGGACTTGGTGGCTGGTAAACTGACATATCCCAAGGTTTTGGGGGTGGATAAGTCTAAGGAGATTGCTCGGAAATTGGTGGAGGATTCCAAGGAAATCTTGGTTGGGTTTGATACCCCAAAGGTAGCTCCACTCTTTGCTGTAACTAATTACATTGCAGGCAAAATCAATTAG 789 0.5627 MRYTLLSGGKRIRPVLCIAACELVGGLDYAALPAACAVEMVHAMSLIHDDLPCIDNDDLRRGKPTCHKVFGENVAILAGDALQARAFEHVAASTKNVCPTRVVRAIVELAKSMAAEGVAGGQVMDVSSEGLSSEEGLERVELIHLHKSAALLEGAVVLGAIMGGGSDEEVERLRMFGRCVGLMGQVVDDILDVTQSTEKLRKTAGKDLVAGKLTYPKVLGVDKSKEIARKLVEDSKEILVGFDTPKVAPLFAVTNYIAGKIN* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1454 262 CDD Trans_IPPS_HT 1 257 IPR000092 GO:0008299
Pvu1g1454 262 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 260 - -
Pvu1g1454 262 Pfam Polyprenyl synthetase 2 230 IPR000092 GO:0008299
Pvu1g1454 262 SFLD Isoprenoid Synthase Type I 1 258 - -
Pvu1g1454 262 SUPERFAMILY Terpenoid synthases 1 239 IPR008949 -
Pvu1g1454 262 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 7, CHLOROPLASTIC 1 260 - -
Pvu1g1454 262 ProSitePatterns Polyprenyl synthases signature 1. 46 62 IPR033749 -
Pvu1g1454 262 Gene3D Farnesyl Diphosphate Synthase 1 262 IPR008949 -
Pvu1g1454 262 SFLD Polyprenyl Transferase Like 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1454 Pvu-Chr1 38783900 38785266 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1454 K13789 - gmx:100778289 379.407