Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1440 ATGGGTTTGGAGTTGTTCTTTTGGCTTATCATTTGTTTCCCTTTCCACATCGCTTTTTTAGCCTCAACGTTCTACCAGGTTTTGATGCTGTCTGACTTAGAAGCCGACTTTATCAACCCATATGATGCTTCATCAAGGATTAATTACTTCATCGTTCCTGAGTTTATTGGGCAGGGATTATTGTGCGCTTTTTGCCTTTTAACAGGTCACTGGATCATGTTTTTGATGACGGTTCCTGTTACATGCTACCATATGATGCTGTACATGAAACAGCAGCATCTCATCGATGTTACTGAAGTGTTTAGAGTACTTAACTCTGAGAAGAAATTTCGCTTAGCCAAACTTGCTTATTACTTAACAATCATCATAATAATTGTCTTCAGGCTTGTATTGATGCTTGTCTACTATTTAGATTCTGAAGATGAATGA 429 0.3776 MGLELFFWLIICFPFHIAFLASTFYQVLMLSDLEADFINPYDASSRINYFIVPEFIGQGLLCAFCLLTGHWIMFLMTVPVTCYHMMLYMKQQHLIDVTEVFRVLNSEKKFRLAKLAYYLTIIIIIVFRLVLMLVYYLDSEDE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1440 142 PANTHER PROTEIN CORNICHON 3 132 - -
Pvu1g1440 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Pvu1g1440 142 PANTHER CORNICHON-RELATED 3 132 - -
Pvu1g1440 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1440 Pvu-Chr1 38600226 38604171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1440 K20368 - gmx:100527262 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1440 1 38600226 38604171 Pvu1g1440 1 38600226 38604171 ECH
Pvu1g1440 1 38600226 38604171 Pvu7g2645 7 49507776 49511741 PCT