Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1436 ATGAACAACCAACTCATCTTCCTTCTATTCTTCCTTCTCACCCAATCTCTTCTCGCCACCTCATCACCTCCAAACCCGATCTTAATCACGCTCTCCGTCGCCGACTTCGGCGCCGCCGGTGACGCCAGCAGCTACGACACCGAACCTATCCAGTCGGCCATCAACTCCTGTCCGGAGGGCGGTCCCTGCCACGTCATCTTCCCGGCGCCGGGAAAATACCTGACGGCCACCGTATTCCTGAAATCCGGCGTGGTGCTGGTCGTGGAGCCTGGTGCCACCATCCTGGGCGGCTCCAGGCTGGAGGACTACCCGAAGGAGTCGTTGCGGTGGTACGTGGCGGTGGCGGAGAATGCGACGGACGTGGGAATCCGCGGCGGTGGAGTGGTGGATGGTCAGGCTTCTAAATTCGTAGTGAGGGAAGATCCGAGGAAGAACGTGATGGTTAGTTGGAACCAAACTGGGGCTTGCTTAGGAGACGAATGCAGACCTAGACTCATTGGATTCATTGGTTGCAACAATGTTGAAGTTTCTAACATCACTCTTAACCATCCTGCTTATTGGTGTTTACACTTGGTGCGGAGTAATAACATATCCATTAAAGATATTGCAATTAATGGGGACTTCAACATACCAAACAATGATGGGATTGACATTGAGGACTCAAACAACACAGTAATCACTCGATGCCACATCGATACTGGGGATGATGCAATCTGTCCAAAGTCATACACAGGTCCTGTTCACAACCTTACAGTCACTGACTGTTGGATTCGATCCAAATCTTCTGCAATTAAACTTGGCAGTGCTAGTTGGTTTGATTTCAAGCACTTTGTGTTTGATAATATCACTATTGTTGATTCTCATAGAGGGATTGGATTCCAGATCCGTGATGGAGGAAATGTAAGTGACATTGTATTCTCAAACATTAATATCAGCACAAGATATTATGACCCGTTATGGTGGGGGAGAGCAGAGCCCATCTATGTCACGAGTTGCCCACGAAACTCAGCCTCAAAGGAGGCTTCAATCTCTGATGTATTTTTCATTAACATCACTGCAAATTCTGAAAATGGCATCTTTCTATCTGGTTCAAAGAGAGGATTGCTTAGAAATTTGAGATTCATCAACATGGACGTTACATATAGAAGGTTCACTAATTATGCTGGTGGGTTATTGGACTACAGGCCAGGATGCCAAGAGTTAGTTAAACACAGGACTGCGGGCATAATGATGGAGCACATTGAAGGGCTTGAGGTTAAAAATGTTGAAATTAGATGGTCAAACAATCAACTAGAGCAGTGGAATAATCCTTTAGAGTTCAAACCATCTACTGTGAATAACATATCTTTCCTGAATTTTAGTTCTGGTTTCTATACAGATAGCAAATCAAATTATTAA 1398 0.4571 MNNQLIFLLFFLLTQSLLATSSPPNPILITLSVADFGAAGDASSYDTEPIQSAINSCPEGGPCHVIFPAPGKYLTATVFLKSGVVLVVEPGATILGGSRLEDYPKESLRWYVAVAENATDVGIRGGGVVDGQASKFVVREDPRKNVMVSWNQTGACLGDECRPRLIGFIGCNNVEVSNITLNHPAYWCLHLVRSNNISIKDIAINGDFNIPNNDGIDIEDSNNTVITRCHIDTGDDAICPKSYTGPVHNLTVTDCWIRSKSSAIKLGSASWFDFKHFVFDNITIVDSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPLWWGRAEPIYVTSCPRNSASKEASISDVFFINITANSENGIFLSGSKRGLLRNLRFINMDVTYRRFTNYAGGLLDYRPGCQELVKHRTAGIMMEHIEGLEVKNVEIRWSNNQLEQWNNPLEFKPSTVNNISFLNFSSGFYTDSKSNY* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1436 465 SUPERFAMILY Pectin lyase-like 23 393 IPR011050 -
Pvu1g1436 465 Pfam Glycosyl hydrolases family 28 112 381 IPR000743 GO:0004650|GO:0005975
Pvu1g1436 465 PANTHER PECTIN LYASE-RELATED 24 457 - -
Pvu1g1436 465 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 24 457 - -
Pvu1g1436 465 Gene3D - 14 389 IPR012334 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1436 29 459 Glycoside Hydrolase AT3G57790 67.800 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1436 - - gmx:100794954 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1436 1 38523612 38527029 Pvu1g1436 1 38523612 38527029 ECH