Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1434 ATATTCGAAATACCAAAGGACCATAGAAAAGCTAAGCCCTTCCATGATCATGTTTTTGTTTTCTCAATAGCTGATGACCATATATGGTTCCGTAATTACCAGATTTCTACTCATCATAATGAAGCAGATAAATTACCAAAGGGAGGCCTTGATAAAATGACATTGATTGAGGTCGGTCCACGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTTGGAGGCCCAACATTATATGAGAATCCATTCTATGTATCTCCAAATCAGGTTCGAGCTTTGGAGAAAAAGAAGAAGGCTGGAAAGTTTGCGAAGAAGGTCAAAGCAAAGACAAGGAGGAAAATGCATGAGATGTCTAATCCTCTGGAGCCTGATGAGTTTGCAGATATGTGGAAAGATTGA 402 0.3881 IFEIPKDHRKAKPFHDHVFVFSIADDHIWFRNYQISTHHNEADKLPKGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQVRALEKKKKAGKFAKKVKAKTRRKMHEMSNPLEPDEFADMWKD* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1434 133 MobiDBLite consensus disorder prediction 114 133 - -
Pvu1g1434 133 ProSiteProfiles Brix domain profile. 1 75 IPR007109 GO:0006364|GO:0019843
Pvu1g1434 133 MobiDBLite consensus disorder prediction 105 133 - -
Pvu1g1434 133 Pfam Brix domain 1 68 IPR007109 GO:0006364|GO:0019843
Pvu1g1434 133 PANTHER RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2 1 133 - -
Pvu1g1434 133 PANTHER RIBOSOME BIOGENESIS PROTEIN BRIX 1 133 IPR026532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1434 Pvu-Chr1 38501794 38503812 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1434 K14820 - pvu:PHAVU_001G1379001 262.692