Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1433 ATGGGGAAGAAGAGAAAGCACAGTGAGAGTAGTGAACTTGTTGCACAGCCCAAAAAGGAAGATACTGCTCCAGAGAGACCAACGAGGACCCTTTTGGGTTGGAAGGATAAGAGTCTAGTCACTGATGAAGTCGACGACAGCAACATTGGTTCACCAATATTCAGGAACAAAGAGAAGGTTTTGGTCACTTGCTCTAGGCGCATCAGTTACAGGTACCGGCATTTGATGTTGAACTTGGTGTCACTTTTGCCGCATTGCAAGAAGGATAACAAGGTTGAATCAAAGGAAACTAAAGGCGCCACCCTGAACGAGCTTGTTGAGCTCAAAAGTTGCTCCTCGTGTTTATTTTTTGAGTGCAGGAAGCAAAAAGATCTTTATCTCTGGATGGCCAAATGCCCCAATGGCCCATCTGTAAAAATTTTAGTTAGTGCGGTGCATACAATGGAGGAGTTGAAGCTAACAGGAAATCACCTAAAAGGTTCCCGTCCTCTTTTGACGTTTTCTGCAAATTTTGAAAAAGATGCACACTGGAAACTGTTAAAGGAGATGTTGTTACAGATATTCGAAATACCAAAGGACCATAGAAAAGCTAAGCCCTTCCATGATCATGTTTTTGTTTTCTCAATAGCTGATGACCATATATGGTTCCGTAATTACCAGATTTCTACTCATCATAATGAAGCAGATAAATTACCAAGGGGAGGCCTTGATAAAATGACATTGATTGAGGTCGGTCCACGATTCTGCTTGAACCCAATTAAAATATTTGGTGGCAGTTTTGGAGGCCCAACATTATATGAGAACCCATTCTATGTATCTCCAAATCAGGTTCGAGCTTTGGAGAAAAAGAAGAAGGCTGGAAAGTTTGCGAAGAAGGTCAAAGCAAAGACAAGGAGGAAAATGCATGAGATGTCTAATCCTCTGGAGCCTGATGAGTTTGCAGATATGTGGAAAGATTGA 960 0.4177 MGKKRKHSESSELVAQPKKEDTAPERPTRTLLGWKDKSLVTDEVDDSNIGSPIFRNKEKVLVTCSRRISYRYRHLMLNLVSLLPHCKKDNKVESKETKGATLNELVELKSCSSCLFFECRKQKDLYLWMAKCPNGPSVKILVSAVHTMEELKLTGNHLKGSRPLLTFSANFEKDAHWKLLKEMLLQIFEIPKDHRKAKPFHDHVFVFSIADDHIWFRNYQISTHHNEADKLPRGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQVRALEKKKKAGKFAKKVKAKTRRKMHEMSNPLEPDEFADMWKD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1433 319 Gene3D - 58 250 - -
Pvu1g1433 319 PANTHER RIBOSOME BIOGENESIS PROTEIN BRIX 1 319 IPR026532 -
Pvu1g1433 319 Pfam Brix domain 65 254 IPR007109 GO:0006364|GO:0019843
Pvu1g1433 319 PANTHER RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2 1 319 - -
Pvu1g1433 319 MobiDBLite consensus disorder prediction 1 28 - -
Pvu1g1433 319 SUPERFAMILY Class II aaRS ABD-related 59 258 - -
Pvu1g1433 319 ProSiteProfiles Brix domain profile. 58 261 IPR007109 GO:0006364|GO:0019843
Pvu1g1433 319 SMART Brix_2 61 255 IPR007109 GO:0006364|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1433 Pvu-Chr1 38488553 38495915 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1433 K14820 - gmx:100797218 585.489