Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1421 ATGGCTATTGCTGCAGCAGCTGTTGTCCTGCCATTGGGTCTCCTCTTCTTCGCCTCCGGCCTCCTTGTCAATCTCATTCAGGCGATATGCTACGTTGTTTTAAGGCCGGTGTCGAAGAATTTGTACAGACGGATCAACCGGGTTGTAGCAGAACTGTTGTGGCTGGAGCTTGTATGGCTTATTGATTGGTGGGCAGGAGTTAAGATCCAAATATTCACAGATCATGAAACCTTTCGTCTAATGGGTAAAGAGCATGCCCTTGTGATGAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGTCTTGGCAGCACCCTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAGGTCAGGCATCCAACAACTGAGTGATTATCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACACAGGCAAAACTATTGGCTGCTAAGGAATATGCAACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTAATTCCAAGAACTAAGGGTTTTGTGTCTGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTAGCTGTCCCCAAGAATTCCCCTGCTCCTACAATGCTAAGACTCTTCAAAGGGCAAGCTTCAGTGGTGCATGTTCATATCAAGCGGCATTTGATGAAGGAATTGCCAGAAACAGACGAGGCCGTTGCTCAATGGTGTCGAGATATATTTGTGGCCAAGGATGCTCTGTTAGACAAACATATAGCCGAGGATACTTTTAGTGACAAAGAGCTGCAGGATACTGGTCGACCAATAAAGTCTCTTCTGGTAATGATGTCTTGGGCCTGTCTGGTTGTTGCGGGGTTTGTAAAGTTCCTACAACGGTCTTCACTACTATCTTCATGGAAGGGTGTTGCATTCTCAGCTGTTGGTTTGGCAGTTGTTACTGCACTGATGCAAATTATGATTCAATTCTCACAGTCAGAGCGTTCAAACCCTACGAAGATCGCACCAGTTCAGTCAAAAAGCAAGGGGGAACAACTAGAGGCTCAGAATGACAAGCAACAGTAG 1164 0.4519 MAIAAAAVVLPLGLLFFASGLLVNLIQAICYVVLRPVSKNLYRRINRVVAELLWLELVWLIDWWAGVKIQIFTDHETFRLMGKEHALVMSNHRSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLRSGIQQLSDYPLPFWLALFVEGTRFTQAKLLAAKEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAVPKNSPAPTMLRLFKGQASVVHVHIKRHLMKELPETDEAVAQWCRDIFVAKDALLDKHIAEDTFSDKELQDTGRPIKSLLVMMSWACLVVAGFVKFLQRSSLLSSWKGVAFSAVGLAVVTALMQIMIQFSQSERSNPTKIAPVQSKSKGEQLEAQNDKQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1421 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 38 286 - -
Pvu1g1421 387 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Pvu1g1421 387 MobiDBLite consensus disorder prediction 361 377 - -
Pvu1g1421 387 SMART plsc_2 86 208 IPR002123 GO:0016746
Pvu1g1421 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Pvu1g1421 387 MobiDBLite consensus disorder prediction 361 387 - -
Pvu1g1421 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Pvu1g1421 387 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Pvu1g1421 387 CDD LPLAT_LCLAT1-like 62 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1421 Pvu-Chr1 38275447 38285243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1421 3 385 Miscellaneous Gene Families AT3G57650 72.165 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1421 K13523 - gmx:100792858 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1421 1 38275447 38285243 Pvu1g1421 1 38275447 38285243 ECH
Pvu1g1421 1 38275447 38285243 Pvu7g2628 7 49341508 49350547 PCT