Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1418 ATGGAGAGTGGAGTCAGTGGTAAGAAAGCATCACATCCACCATCTTCGCAGCAATTCATTTCTGTTACCACCCATCTGCTTTATTTGGAAAAGGAAACTGGGGAATCAAGCATAGGAGTGTCTCAAGAGAGGGTGACAGAGGATGCTGAGAAATATGAATTGGAATTTGATGATTCTCCCATAGAGCAAGTGAGGCTAACAGTTCCAATCACTGATGACCCTACTCAGCCAGCATTAACATTTAGGACATGGGTTCTGGGGTTGGCATCATGTGTGTTTCTTGCCTTTGTGAACCAATTTTTGGGCTACAGAACCAACCCTTTAAAAATCTCTTCAGTCTCAGCACAGATTGCTACACTCCCTCTTGGCAAACTGATGGCTGCAACTCTTCCAACTAAACCAATCCGAGTGCCATTCACGAAATGGTCATTTTCAATGAATCCGGGGCCATTCACTTTGAAGGAGCATGTGCTTATCACCATCTTTGCTACATCTGGATCTAGTGGTGTTGATGCAGTCGACGTCATCACAATTGTTAAGGCTTTCTATCACAGGAGCATTCATCCAGTAGCAGCTTATTTGTTAGTACTGTCAACCCAAATGCTTGGGTATGGATGGGCTGGGATTTTTAGAAGATTCCTAGTTGACTCCCCTTTTATGTGGTGGCCTGAAAACCTTGTGCAGGTGTCTCTATTCAAGGCATTTCATGAAAAAGAAAAAAGACCTAAAGGAGGATACACTAGGATGCAATTCTTTTTCCTAGTCTTTGTAGCGAGCTTTGCCTATTACACTCTTCCAGGGTACCTTTTCCAAGCAATATCAACCATCTCCTTTGTTTGCTTGATTTGGAATGATTCCATCACAGCCCAACAAATTGGTTCAGGCATGAATGAAATTGGCATCGGCTCATTTGGCCTCGATTGGAACACTGTTGCAGCCTTCTTAGGTAGTCCTTTAGCTGTACCTGGCTTTGCCATCATCAACATGTTAATAGGATTTATGCTGGATATCTATGTTCTGATTCCCCTTGCCTATTGGAGCAATTTATATGATGCCAAAAGGTTCCCCCTCATTAGTTCTCACACGTTTGACTCAACTGGTGTAACATATAATGTTACCCGGGTTCTAAATCCCAGAACTTTTGACATTGATTTGGATAGTTATAACAATTACAGCAAGATCTATCTTAGTATCACATTTGCATTTGAGTATGGATTAAGCTTTGCAACTTTGACTGCCACTATTTCCCACGTTGTCCTCTTCCATGGAGATATGATTCTTCAGACGTGGAGGAAGACAACAAGAGCACCAAAAGAACAACTTGGAGATGTCCATACAAGAATTATGAAGAGAAACTACGAACAAGTCCCTGAATGGTGGTTTGTCACCATATTGATCCTTATGGTTGTTGTGGCCTTGGTTGCTTGTGAATGCTTTGGGAAGCAACTCCAACTGCCATGGTGGGGAATTTTACTTTCTCTAACAATTGCATTAGTCTTCACCTTACCAATTGGGATTATTCAAGCTACAACAAATATAAAAATAGGACTCAACGTGATTTCAGAGTTAATAATTGGATACATTTACCCAGGAAAGCCCCTTGCTAATGTAGCCTTCAAGGTTTATGGACATGACAGCATGCTACAGGCACTGGCGTTTCTCAGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCTAAGTCTATGTTCATTGCACAGCTTGTAGGCACAGTTGTTGCTTCATCTGTCTACTTTGCCACATCTTGGTGGCTTCTCACGTCTATTGAAAACATTTGTGATGAAGCATTGTTGCCAAAGGGTAGTCCATGGACATGCCCAGGTGACGATGTGTTCTATAATGCTTCAATTATATGGGGAGTTGTAGGACCACAGAGAATGTTTGCCAAGGATGGTGTTTACCCTGGGATGAATTGGTTTTTCCTCATTGGTCTACTTGCTCCCATTCCAGTGTGGTTGCTTTCTTGTAAATTCCCCAACCACAAGTGGATTCAACTCATCAACATTCCCATTATCGCTGCAGGTGCATGCAACATTCCACCAGCCAGATCAGTGAATTATATTACATGGGGAACTGTTGGAATCTTCTTCAATTTCTATGTATATAGAAAGTTTAAGGCATGGTGGGTCCGGCATACTTACATCCTTTCAGCTGCTTTAGACACTGGAGTTGCTTTCATGAGTATGATCCTTTATTTTACCCTTCAATCTAATGGTATTTTTGGTCCATCCTGGTGGGGTCTTGATGCAGACCACTGCCCTTTGGCCAAATGCCCTACAGCTCCAGGTGTATTTGCCGAGGGATGCCCTCTTCTTTGA 2340 0.4231 MESGVSGKKASHPPSSQQFISVTTHLLYLEKETGESSIGVSQERVTEDAEKYELEFDDSPIEQVRLTVPITDDPTQPALTFRTWVLGLASCVFLAFVNQFLGYRTNPLKISSVSAQIATLPLGKLMAATLPTKPIRVPFTKWSFSMNPGPFTLKEHVLITIFATSGSSGVDAVDVITIVKAFYHRSIHPVAAYLLVLSTQMLGYGWAGIFRRFLVDSPFMWWPENLVQVSLFKAFHEKEKRPKGGYTRMQFFFLVFVASFAYYTLPGYLFQAISTISFVCLIWNDSITAQQIGSGMNEIGIGSFGLDWNTVAAFLGSPLAVPGFAIINMLIGFMLDIYVLIPLAYWSNLYDAKRFPLISSHTFDSTGVTYNVTRVLNPRTFDIDLDSYNNYSKIYLSITFAFEYGLSFATLTATISHVVLFHGDMILQTWRKTTRAPKEQLGDVHTRIMKRNYEQVPEWWFVTILILMVVVALVACECFGKQLQLPWWGILLSLTIALVFTLPIGIIQATTNIKIGLNVISELIIGYIYPGKPLANVAFKVYGHDSMLQALAFLSDFKLGHYMKIPPKSMFIAQLVGTVVASSVYFATSWWLLTSIENICDEALLPKGSPWTCPGDDVFYNASIIWGVVGPQRMFAKDGVYPGMNWFFLIGLLAPIPVWLLSCKFPNHKWIQLINIPIIAAGACNIPPARSVNYITWGTVGIFFNFYVYRKFKAWWVRHTYILSAALDTGVAFMSMILYFTLQSNGIFGPSWWGLDADHCPLAKCPTAPGVFAEGCPLL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1418 779 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 12 778 - -
Pvu1g1418 779 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 63 743 IPR004813 GO:0035673
Pvu1g1418 779 PANTHER ISP4 LIKE PROTEIN 12 778 IPR004648 GO:0055085
Pvu1g1418 779 Pfam OPT oligopeptide transporter protein 79 741 IPR004813 GO:0035673
Pvu1g1418 779 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 57 744 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1418 Pvu-Chr1 38218114 38221257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1418 57 779 Organic Solute Cotransporters AT4G26590 65.193 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1418 - - gmx:100820498 1407.89