Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1411 ATGGGAAAAGCACCAGCATTGCTTGTTGATGACCTGCAGGATGGGGCTCAGAATGGCCTTGAATTGAAAAACGGAACTTGCAAAGCAACTGCTACCGTTGGTGATAAGACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAATCTTGGAGAATGGGTTCGTCCCACTGTGAGGGGCACCAAACCCGTGTCGTGCAAAGGCCTTTCGGCAGTACCTTTGGAAGACAAAATACTAATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGGTTGACACCCAATATGTTAGGCAGCAGCAAGAATCTTTGGGTACTGAGGTGGTTGCATGGAGTAAAGGTGTGGTAGGAAATGCGGAGAAGCCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGCAAAGGAACATTGATATCAATGCTTATGAAGGAGTTTCCCTCTATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCGAGAGATATGGAGAAAGACGGGGTCCATTATCATTTTACTGAGAAGAGTATAATGGAGAAAGAAATCAAAGAGGGAAAGTTTCTTGAGTTTGCTTCTGTCCATGGAAATCTGTACGGAACTAGTGTTGACGCTGTGGAACTGGTGGCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGTGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTGTATGTCCCCCGTCAATGGAGGAGCTGGAGAAGCGCCTTCGTGACCGAGGGACAGAGACTGAGGAACAGATCCTGAAGCGACTAAGGAATGCTGCTGCAGAGATTGATCAAGGAAAATCTTCTCACATATTTGATTTCATCCTGTACAATGACAAACTTGTTGAGTCTTACGACAGACTTAAGAAACTATTGGGACTTGATGATTTTGTCACTACTCCTAAATCGGGCCCTGGAGAGATTGATCTACCAATTGACCATTCAGTGTCAAAAATTGACAACAAAATCATCATAAACCGCATCTCCTCAGGAGAGAAGGAATCAAAGAATTTGATAATATTAGATGTTTCCTCACTAAAAGGAGGTGCTCCTGGGCGGACCAGAGGCCTAAATTTCCAAGCCATTGGCTCCTTCTCAAATGGCTTGACTGAGATAGAGGGACTTAGCTAA 1197 0.4403 MGKAPALLVDDLQDGAQNGLELKNGTCKATATVGDKTYVIGGADDGTLSIEVQIFDRNLGEWVRPTVRGTKPVSCKGLSAVPLEDKILILKKGSKPDDQIWFLEVDTQYVRQQQESLGTEVVAWSKGVVGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRDMEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVDAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAAAEIDQGKSSHIFDFILYNDKLVESYDRLKKLLGLDDFVTTPKSGPGEIDLPIDHSVSKIDNKIIINRISSGEKESKNLIILDVSSLKGGAPGRTRGLNFQAIGSFSNGLTEIEGLS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1411 398 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Pvu1g1411 398 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 322 - -
Pvu1g1411 398 Pfam Guanylate kinase 133 314 IPR008145 -
Pvu1g1411 398 SMART gk_7 132 318 IPR008145 -
Pvu1g1411 398 CDD GMPK 135 254 - -
Pvu1g1411 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Pvu1g1411 398 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Pvu1g1411 398 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Pvu1g1411 398 Gene3D - 129 318 IPR027417 -
Pvu1g1411 398 Gene3D - 24 122 IPR015915 GO:0005515
Pvu1g1411 398 PANTHER GUANYLATE KINASE-RELATED 1 322 - -
Pvu1g1411 398 SUPERFAMILY Galactose oxidase, central domain 29 113 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1411 Pvu-Chr1 38121325 38125430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1411 K00942 - gmx:100808931 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1411 1 38121325 38125430 Pvu1g1411 1 38121325 38125430 ECH
Pvu1g1411 1 38121325 38125430 Pvu7g2613 7 49211307 49214906 PCT