Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1407 ATGACTGTCACACCTAAGATCTTGGTTAACGATAGGAAATTGGTTGTTCATGGCAAGACCATATTAACCGGAGTACCGGACAACATTGTGCTGACTCCAGGATCTGGAAGTGGCCTTGTGACTGGTGCTTTTGTTGGTGCTACAGCTTCCCACAGCAAAAGTCTCCATGTGTTTTCAATGGGTGTCTTAGAGGAGCTCCGGTTCCTATGCTGCTTTCGGTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACTTGTGGGAGGGATGTTCCTCTGGAGACACAGTTCATGCTAATTGAGAGCAAAGAGAGTGAAGTAGATGGAGAGAATTCTCCAACCATCTACACTGTCTTTCTTCCTCTTCTCGAAGGTCCATTCCGAGCTGTTCTTCAGGGCAATGAGAAGAACGAGATAGAGATTTGCCTCGAGAGTGGGGATAACGCTGTCGAGACTGATCAAGGCCTTCACCTAGTCTACATGCATGCTGGGACCAACCCCTTTGAAGTCATCAATCAAGCAGTCAAGGCTGTGGAAAAACACATGCAAACTTTTCTTCACCGTGAGAAGAAAAAGTTGCCATCTTTTCTTGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTTGAGGATGGTCTGAAAAGTCTATCTGAGGGAGCTACACCACCACGGTTCCTCATCATAGATGATGGCTGGCAACAGATTGAAAGTAAACAAAAGGATCTTGACTGTGTTGTACAAGAAGGGGCACAGTTTGCTACTAGGTTGACTGGTATTAAAGAGAATACTAAATTTCAGAAGAAAACACCCAGCAATGAGCAGACATCAGGTCTTAAGCATTTAGTAGATGGAGTAAAGCAGCATCACAACGTGAAAAATGTTTATGTATGGCATGCACTTGCTGGTTATTGGGGTGGAGTTAAGCCCGCAGCAACTGGCATGGAGCATTATGACACAGCCTTGGCCTATCCAGTGCAGTCACCAGGTGTCCTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCCGTACATGGCCTTGGCCTAGTGCACCCAAAGAAGGTTTTCAATTTCTACAATGAGCTCCATGCTTACTTGGCTTCATGTGGAGTGGATGGAGTGAAGGTTGATGTGCAGAACATTATTGAGACCCTTGGTGCTGGACATGGTGGAAGAGTCTCTCTTACACGAAGCTATCATCACGCTCTCGAGGCTTCCATTGCTCGTAACTTTACTGACAATGGATGCATTGCTTGCATGTGTCACAACACTGATGGCCTTTATAGTTCCAAGCAGACTGCTGTTGTGAGAGCCTCTGATGATTTCTACCCTCGTGATCCCGCTTCCCACACCATCCATATTTCATCTGTTGCATACAACTCGCTTTTCCTTGGAGAGTTCATGCAACCTGATTGGGACATGTTTCATAGTTTACACCCTGCAGCAGAATATCATGCTGCAGCTCGTGCAATTGGTGGATGTCCAATTTATGTTAGTGACAAGCCAGGCCACCACAATTTTGATCTTCTTAAGAAGCTGATTCTTCCCGATGGTTCGGTTCTCCGAGCACAGTTACCAGGCAGGCCAACTCGTGATTCTCTCTTTGTTGATCCAGCCAGAGATGGGACTAGCTTGCTCAAAATCTGGAACATGAACAAATGCTCTGGAGTTGTTGGTGTATTTAACTGCCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAAACTCGCATCCATGATACATCTCCCGGCACACTCACTGGCTCTGTCTGTGCCTTTGATGTTGACCCTATCACACAAGTAGCAGGTGCTGAATGGCTTGGAGAGACAATTGTTTACGCTTATAGATCAGGTGGGGTGATTCGGCTACCAAAGGGGGTTTCAGTTCCGGTGACACTAAAAGTTCTTGAGTTTGAACTTTTCCATTTCTGTTCAATCCATGACATAGCACCAAGTATTTCATTTGCAGCAATAGGGCTACTGGATATGTTCAACACTGGAGGAGCTGTGGAGCTGGTTGAAATTCACAGAGCCTCTAACAACAAACCAGAACTGTTTGATGGTGAGGTGTTGTCAGAATTAACCTCTTCTCTGAGTCCTAACCGAGCAGCAACCGCAACTATTTCTCTTAAAGTCAGGGGAACAGGCAGATTTGGAGTTTACTCCTCTCAACGCCCACTGAAGTGTGTAGTAGGTGGCAATGAAACCGACTTCAGCTTTGACTCGGAGACTGGGTTGGCAACCTTCTCCATCCCAGTTCCTCAAAAGGAGATGTACAGATGGGCAATAGAGATCCAAGTTTGA 2322 0.4621 MTVTPKILVNDRKLVVHGKTILTGVPDNIVLTPGSGSGLVTGAFVGATASHSKSLHVFSMGVLEELRFLCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKESEVDGENSPTIYTVFLPLLEGPFRAVLQGNEKNEIEICLESGDNAVETDQGLHLVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEDGLKSLSEGATPPRFLIIDDGWQQIESKQKDLDCVVQEGAQFATRLTGIKENTKFQKKTPSNEQTSGLKHLVDGVKQHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFTDNGCIACMCHNTDGLYSSKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGHHNFDLLKKLILPDGSVLRAQLPGRPTRDSLFVDPARDGTSLLKIWNMNKCSGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCAFDVDPITQVAGAEWLGETIVYAYRSGGVIRLPKGVSVPVTLKVLEFELFHFCSIHDIAPSISFAAIGLLDMFNTGGAVELVEIHRASNNKPELFDGEVLSELTSSLSPNRAATATISLKVRGTGRFGVYSSQRPLKCVVGGNETDFSFDSETGLATFSIPVPQKEMYRWAIEIQV* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1407 773 PANTHER - 1 773 IPR008811 -
Pvu1g1407 773 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 773 - -
Pvu1g1407 773 SUPERFAMILY (Trans)glycosidases 195 529 IPR017853 -
Pvu1g1407 773 Gene3D Aldolase class I 197 520 IPR013785 -
Pvu1g1407 773 Pfam Raffinose synthase or seed imbibition protein Sip1 9 756 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1407 Pvu-Chr1 38007144 38012525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1407 1 556 Glycoside Hydrolase AT3G57520 82.226 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1407 K06617 - gmx:100807861 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1407 1 38007144 38012525 Pvu1g1407 1 38007144 38012525 ECH
Pvu1g1407 1 38007144 38012525 Pvu7g2607 7 49163379 49167532 PCT