Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1403 ATGAGTAAAAAGGTCTCTGGTGTTATTTCCCGCCAAGTTTTGCCTGTTTGTGGCAATCTTTGTTTCTTCTGCCCTTCTCTGAGGGCAAGGTCAAGACAACCTGTTAAGAGGTATAAGAAGCTCATTGCTGATATTTTCCCTCGTAATCAGGAGGACGGAGCAAATGATAGGCAAATAGGAAAACTATGTGATTATGCTGCCAGAAATCCTTTACGCATCCCAAAGATTATGCAAGCCCTTGAGCAAAGGTGTTACAGGGAGTTAAGAAACGAGAATATCCGTTCAGCCAAAATAGTCATGTGCATTTACAAGAAGTTTTTATTTTCTTGTAAAGAGCAAATGCCATTGTTTGCGAATAGCTTGCTAAGTATTATTCACACGCTACTAGATCAATCGCGTCAAGATGAAATGAGAATTATAGGATGTCAAATTTTGTTTGATTTTGTAAATAATCAGAGTGATGGAAGTTACCTATTCAACTTAGAAGCTGTTATCCCGAAACTTTGTCAATTAGCCCAAGAAACAGGAGATGATGAAAGGGCCAGGATGAGTCGTTCAACTGGTTTGAAAGCACTTTCAGCAATGGTTCGATTTATGGGTGAAAATTCTCACATGTCAGTTGAATTTGATAATATCGTTTGTGTTGTCTTGGAAAATTATGAAGTTCCGAAGAACAACTTAGCAAATGTTAGTCACGAGGAAGAAAGTGTGGAAAATATGTGGGTCCAAGATGGGATGAGCAATGAGGATCAAAGCTCGCCTTTGCTTGATGTGAAAACGAGAAATCCTCCATGGAGAAAAGTTGTTAACGAAAAAGGCGAAATGATTGTAGCAATGGAAGATGACAAGAATCCATCTTTTTGGTCTGGGGTTTGTCTACATAATATGGCCAACTTAACCAGAGAGGGAACCACTATACGTCGTGTAATGGAATCTATATTTCGCTACTTCGATAGTGGAAACTTATGGTCGATCGATGATGGCCTTGCCATTTCTGTTTTAAAGGATATATTATTTTTGATGGATGATTCAGAGAAAAACACACATGTTTTGCTATCAATGTTGATTAAGCATTTGGATCATAAAGCTGTCCTTAAAGAACCACATATGCAACTTGACATTGTCGAGGTCACCACTTCACTTTCCCAATATGCAAAGGTCCAACCTTCTATATCAATAATTGGTGCAGTGAGTGATATGATGAGACATTTGCGAAAGTGCATACATTGCTCTCTAGATGAGTCAAAGTTGGCCCCTGATGAAATAGCCTGGAATAAGAAATTCAGAAGAGTTGTGGATAAGTGCCTTGTAAAGTTGTCAAATAAGGTTGGAGAAGCAGACCCAATTCTTGATGTTATGGCTGTGATGTTAGAGAACATCTCAACTATGACATCAAACTCTAGAACCACAGTCCATGCTGTAAATCGAACTGCTCAAATTGTAGCCTCCTTACCAAATGTATCATATCAGAATAAGGCATTCCCTGAGACCTTGTTTCATCACTTGCTCCTGGTTATGGTCCATCCAGATCATGAAACACGAGCAGTAGCTCACCGTATATTTTCTGTCATTCTTGTTCCAACCACTGTATTTCCTCATCCAAGCTTGTCTATTTCTGATCGTAAGCCATCGAGTGTTCCACGAACTCTCTCTCGAACACTCTCTGTTTTCTCTTCTTCAGCTGTCTTATTTGAGAAGTTAAGACTGGAGAAACGTTCGTCAAGTGAAAAATTAATTCAATTTAAAGAAAATATTCCTGGAGAGATTGAATCAACTAATAGCAATGGTGGGATTGTTAACAAGTTAAAGTCAATGCATAATCGGGTGTCTAGCGTGAATAATCCTCCCCTACTATTGGAAGTGGATGAAATTGCTGCAAAACATGATGATAAAAACTCGGTGTTTCCTGCTCTTAGGCTGAATAGGCTTAAGATAAGTCGATTATTATCATCTATTTGGGTACAATCTATATCTCCTGGAAACATGCCTGCAAATTATGAAGCAATTGCTCATTCATACACTTTGATCTTGCTTGTTTCAAGAGAAAAGAATTCTTTTCACGAGGTACTAGTTCGAAGTTTTCAACTTGCTTTTTCTTTATGGAATATTTCTCTAAAAGAAGGGACACTACCACCATCTCGTCGAAGATCACTCTTTACTCTTGCTACTTCAATGATTGTGTTTTCTTCAAAAGAATACAACATTGACCGTCTTGTCCAAAGTGCTAGAAAAGTACTTTTGGAGAGAAAGGTTGATCCGTACCTTGAATTAATTGAAGATTATAATAAGTTGCAAGTTGTCAACTTTGCACCTGACAATCTAAACATCATGTATGGATCTAAAGAAGATGATGATAGAGCCACACAAACGCTTTCAGAGTTATTGGGTTATATTAACGAAACACGGGAAATCTTTGCTTCTGAAATCATTAAGTGCTTAGAGAATTTTGCAAAAGCTGAATTATCTTCAATTAAGGAACAACTGTTGGAAGAATTTGCACCAGATGCCATGTGTGAACTTGGATCTCAATTGAAAATGAATATGGCTACAATGGCTTTTGAGACACCTAATCCAGCAGGGAGGATTTCTGTATGTAATGCATATAACATGCCATACAATGATATGGCTGATAAGTGTGAGGTACTTTTGATGGAAAAGCAGAAGATGTCTAGATTGATGAGTGCCCAACAAAAGCAAGATAATTTAGTGGACTCTCTTTTGTTGAATCAAGATAATGAAATGAAAAATATGGATGTCTCTAACCAAGTGGATTTTCAAAAGGTGGGCATTCCTCCCTTTGATGATAATGTTTGTGTGGATCTATACCAACCAACTTCTGGTCCTCTTCCAGTGTTTGCAAATGAATATGAAAATCACCCTTTCAAACTTCCAGTAGCAAGTCCCTATGATAACTTTCTAAAAGCTGCTGGTTGTTGA 2937 0.379 MSKKVSGVISRQVLPVCGNLCFFCPSLRARSRQPVKRYKKLIADIFPRNQEDGANDRQIGKLCDYAARNPLRIPKIMQALEQRCYRELRNENIRSAKIVMCIYKKFLFSCKEQMPLFANSLLSIIHTLLDQSRQDEMRIIGCQILFDFVNNQSDGSYLFNLEAVIPKLCQLAQETGDDERARMSRSTGLKALSAMVRFMGENSHMSVEFDNIVCVVLENYEVPKNNLANVSHEEESVENMWVQDGMSNEDQSSPLLDVKTRNPPWRKVVNEKGEMIVAMEDDKNPSFWSGVCLHNMANLTREGTTIRRVMESIFRYFDSGNLWSIDDGLAISVLKDILFLMDDSEKNTHVLLSMLIKHLDHKAVLKEPHMQLDIVEVTTSLSQYAKVQPSISIIGAVSDMMRHLRKCIHCSLDESKLAPDEIAWNKKFRRVVDKCLVKLSNKVGEADPILDVMAVMLENISTMTSNSRTTVHAVNRTAQIVASLPNVSYQNKAFPETLFHHLLLVMVHPDHETRAVAHRIFSVILVPTTVFPHPSLSISDRKPSSVPRTLSRTLSVFSSSAVLFEKLRLEKRSSSEKLIQFKENIPGEIESTNSNGGIVNKLKSMHNRVSSVNNPPLLLEVDEIAAKHDDKNSVFPALRLNRLKISRLLSSIWVQSISPGNMPANYEAIAHSYTLILLVSREKNSFHEVLVRSFQLAFSLWNISLKEGTLPPSRRRSLFTLATSMIVFSSKEYNIDRLVQSARKVLLERKVDPYLELIEDYNKLQVVNFAPDNLNIMYGSKEDDDRATQTLSELLGYINETREIFASEIIKCLENFAKAELSSIKEQLLEEFAPDAMCELGSQLKMNMATMAFETPNPAGRISVCNAYNMPYNDMADKCEVLLMEKQKMSRLMSAQQKQDNLVDSLLLNQDNEMKNMDVSNQVDFQKVGIPPFDDNVCVDLYQPTSGPLPVFANEYENHPFKLPVASPYDNFLKAAGC* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1403 978 PANTHER CYCLIN-LIKE PROTEIN 852 978 - -
Pvu1g1403 978 PANTHER CYCLIN-LIKE PROTEIN 6 848 - -
Pvu1g1403 978 SUPERFAMILY ARM repeat 60 525 IPR016024 -
Pvu1g1403 978 PANTHER PUTATIVE, EXPRESSED-RELATED 6 848 - -
Pvu1g1403 978 PANTHER PUTATIVE, EXPRESSED-RELATED 852 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1403 Pvu-Chr1 37959260 37966931 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1403 K21842 - gmx:100817296 1515.75