Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1386 ATGGCAATTAAGGACGACGTGGAAATTGTGAAGGCTCGCATCGACAAGAGGGATTACAGAAGAGTCGTGCTTCGCAACTCGCTCCAAGTGCTCCTCATTAGCGATCCCGTTACCGATAAGTGTGCTGCTTCCATGAACGTTGGCGTCGGTTACTTCAGTGATCCTGCTGGCCTCGAAGGCCTCGCCCATTTCCTCGAGCACATGCTGTTTTATGCGAGTGAAAAATACCCAGTTGAAGATAGCTACTCCAAGTATATTACTGAGCATGGAGGAAGCACCAATGCTTTTACAAGTTCTGAACAAACCAACTATCATTTTGAAGTTAACACAGACGGCTTTGAAGAGGCTCTGGACAGATTTGCTCAGTTCTTCACTAAACCATTGATGTCTCCTGATGCCACCATGAGGGAAATTAAAGCTGTTGACTCTGAAAACCAGAAGAATTTACTATCTGATGGATGGAGAATTAACCAGCTTCAGAAGCATCTGAGTGACGAAGATCATCCATATCATAAGTTTAGCACAGGGAATTGGGACACTTTGGAAGTTAAGCCTAAAGCAAAAGGATTAGACACAAGGAAGGAGCTTCTCAAGTTTTATGATGAAAACTATTCTGCCAATTTAATGCATCTAGTTATATACACAAATGAAACCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTAGAAACACCAGCAAAAGTTGTTTCCATCCTTGTGGTCAGCCATGCAAATCAGAGCATTTGCAGATTCTTGTCAAAACTGTCCCAATAAAGCAAGGTCACAAATTGAGAATTGTATGGCCAGTAACCCCTGAAATTCATCATTACACTGAAGGGCCAAGCAGGTATCTTGGCCATCTCATTGGTCATGAAGGAGAAGGGTCTTTATATTACATCTTGAAAAAATTGGGGTGGGCTACGGGCTTGTCTGCCGGCGAATCAGATTGGAGCTTGGAGTTTGCTTTCTTTACAGTTGTAATTGATCTTACTGATTCTGGTCATGAGCACATAGAAGATATCATTGGGTTGTTGTTCAAATACATTGAGCTTCTACAGCAGTCTGGTGTTTGCGAATGGATTTTTGAAGAGCTTTCTGCAGTTTGTGAGACCAAGTTTCATTATCAGGACAAAATTCCTCCCGGTGATTATGTTGTTGATATTGCATCAAATATGCAGTTTTATCCTGTGAAAGATTGGCTGACAGGATCATCCTTGCCTTTTAAGTTTAGCCCAAATGTTATCCATATGGTACTAAATCAGCTTTCTCCGGACAATGTTCGAATTTTTTGGGAATCTAAAAATTTTGAAGGGCTTACTGATAAGGTGGAGCCATGGTATGGAACTGCGTATTCCCTTGAAAAGATTACTGGCTCTGCTATTCAGGGGTGGATGGCTTCTTCTGCTGATGAAAATATGCATCTTCCAGCTCCTAACAAATTCATTCCAACGGACTTGTCACTTAAAACTGTGCAAGAAACGGTGAAGTTTCCAGTTTTGTTAAGCAGGTCAACTTATTCAGCCTTATGGTACAAGCCAGACACATTGTTTGCTACACCCAAGGCTTATGTTAAGATTGATTTCAATTGCCCATATGCTGGAAGCTCTCCTGAGGCTCAGATTTTGGTGAATATTTTCACACAATTATTGATGGATTACTTGAATGACTATGCTTATTACGCTCAGGTTGCTGGTCTATACTATGGCATAAATCGCACAGATGGTGGTTTCGAGGTGACACTCTTTGGTTATAATCACAAGTTAAGGATTCTGCTTGAAACTATAGTTGAAAAGATTGCAGCATTTGAAGTGAAAACTGACAGGTTTTCAGTCATCAAGGAAATGGTAACCAAGAAATATCAGAATATGAAATACCAACAACCTTATCAGCAGGCTATGTACTATTGCTCTTTGATCTTACAAGATCATACCTGGCCTTGGACAGAACAACTCGACATACTTCCTGCTCTTCAAGTTGAAGATATTGCTAAATTTGTACCATTAATGCTCTCGAGGACATTTTTAGACTTCTATATAGCAGGGAACATTGAAAGCCATGAAGCAGAGTCGATAGTCAAGCACATTGATGATGCTCTCTTTAATTGTTCAAAACCTGTGTGTAAGCCTTTATTCTCATCTCAACATTTGGCCAACCGAGTTGTTAAACTTGAACGTGGCATGAGTTACTTCTACCCTTCAGAATGTCTTAATCCTGAAAATGAGAATTCTGCTCTTCTGCACTACATACAGGTTGGTCGTGATGACTTTAAGCTTAATGTTAAACTTCAGCTTTTTGCTCTTGTTGCAAAGCAACCAACCTTTCATCAGCTACGATCTGTTGAGCAGCTGGGGTACATTACTGTGCTCTTGCAGAGGAATGATTGTGGTATACGTGGACTACAGTTTATTATCCAATCCACAGTAAAGTCTCCCGGGAACATTGAACAAAGGGTTGAGGCATTTCTCAAAATGTTTGAGACCAAGCTTTATGAGATGACAATTGATGAATTCAAG 2526 0.4038 MAIKDDVEIVKARIDKRDYRRVVLRNSLQVLLISDPVTDKCAASMNVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYITEHGGSTNAFTSSEQTNYHFEVNTDGFEEALDRFAQFFTKPLMSPDATMREIKAVDSENQKNLLSDGWRINQLQKHLSDEDHPYHKFSTGNWDTLEVKPKAKGLDTRKELLKFYDENYSANLMHLVIYTNETLDKIQNLVEEKFQDIRNTSKSCFHPCGQPCKSEHLQILVKTVPIKQGHKLRIVWPVTPEIHHYTEGPSRYLGHLIGHEGEGSLYYILKKLGWATGLSAGESDWSLEFAFFTVVIDLTDSGHEHIEDIIGLLFKYIELLQQSGVCEWIFEELSAVCETKFHYQDKIPPGDYVVDIASNMQFYPVKDWLTGSSLPFKFSPNVIHMVLNQLSPDNVRIFWESKNFEGLTDKVEPWYGTAYSLEKITGSAIQGWMASSADENMHLPAPNKFIPTDLSLKTVQETVKFPVLLSRSTYSALWYKPDTLFATPKAYVKIDFNCPYAGSSPEAQILVNIFTQLLMDYLNDYAYYAQVAGLYYGINRTDGGFEVTLFGYNHKLRILLETIVEKIAAFEVKTDRFSVIKEMVTKKYQNMKYQQPYQQAMYYCSLILQDHTWPWTEQLDILPALQVEDIAKFVPLMLSRTFLDFYIAGNIESHEAESIVKHIDDALFNCSKPVCKPLFSSQHLANRVVKLERGMSYFYPSECLNPENENSALLHYIQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLLQRNDCGIRGLQFIIQSTVKSPGNIEQRVEAFLKMFETKLYEMTIDEFK 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1386 842 SUPERFAMILY LuxS/MPP-like metallohydrolase 246 482 IPR011249 GO:0046872
Pvu1g1386 842 Pfam Peptidase M16 inactive domain 192 368 IPR007863 -
Pvu1g1386 842 Pfam Peptidase M16 inactive domain 661 841 IPR007863 -
Pvu1g1386 842 Gene3D - 483 721 - -
Pvu1g1386 842 PANTHER NARDILYSIN 1 842 - -
Pvu1g1386 842 ProSitePatterns Insulinase family, zinc-binding region signature. 50 73 IPR001431 GO:0004222|GO:0006508
Pvu1g1386 842 Gene3D - 631 842 - -
Pvu1g1386 842 Pfam Middle or third domain of peptidase_M16 377 656 IPR032632 -
Pvu1g1386 842 Gene3D - 244 469 - -
Pvu1g1386 842 SUPERFAMILY LuxS/MPP-like metallohydrolase 3 237 IPR011249 GO:0046872
Pvu1g1386 842 SUPERFAMILY LuxS/MPP-like metallohydrolase 725 842 IPR011249 GO:0046872
Pvu1g1386 842 SUPERFAMILY LuxS/MPP-like metallohydrolase 483 707 IPR011249 GO:0046872
Pvu1g1386 842 Pfam Insulinase (Peptidase family M16) 30 165 IPR011765 -
Pvu1g1386 842 Gene3D - 2 237 - -
Pvu1g1386 842 PANTHER ENZYME, PUTATIVE-RELATED 1 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1386 Pvu-Chr1 37632633 37656119 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1386 K01408 - gmx:100788622 1561.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1386 1 37632633 37656119 Pvu1g1386 1 37632633 37656119 ECH