Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1383 ATGGCCGAATATTTTGTCTTCGGAATTGCTGAATCTCTGCTAGGGAAGCTTGCATCTAATCTTTATGAAGAAGTTTCTCGAGCCTTTGATCTGTATGAGGATGTGCAAGGTCTGAGAGACACCTTGTTAATTGTAAAAGGCATGCTGTTGGATGCTGAGGAGAAGAAGGAGAAGAAGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAACGTATGCCTAGATGCGGAAGATGTGTTGGATGGATTTGAGAGCAAAAGCCTGAGAAAACAAGTTCTCAAAGCTTCAGGCAGCACCAGGATGAAGGTTGACCACTTCTTTTCTTCATCTAATTCTCTTGTTTTCCGTTTTAGGATGGCTAGGCAAATAAAAACTGTTAGGCGTAGATTGGATAAGATAGCAGCTGATGGGAGCAAGTTTGGTCTTGAGAGGATTGATATTGATCACAGCCGTCTGCAAAGGAGAGAAATGACTTATTCTCATGTTGATGCTTCACGGGTTATAGGAAGGGAGAAGAATAGGGAAGAAATTATGAAGCTTTTGATGCAACCTCTCCTTCATGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTATTCCCATAGTAGGTATTGGAGGGTTGGGGAAGACCACACTAGCAAAGTTGGTGTTCAATGATAAGAGAATGGATGATCTTTTCCCGTTGAAGATGTGGGTGTGTATTTCTGATGACTTTGACATAAGGCAGATAATTGTTAAAATCATCAACTCTGCTTCTGATCCAACCATTTCTGTTGTTCACCAAGAAAGCATTAACAATTTAGATATTGAGCAGTTACAAAGTCGTCTTAGACATAAACTTTCTTACCAGAAGTTTCTACTAGTCTTGGATGATGTATGGAATGAGGATCGTTCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTTGGTGCAAGTGGAAGCAAAATCATAGTGACAACACGGAGTCACTCAATTGCTTCCATGATGGGCACTGTTCCCTCGTATGTTTTAGAAGGTCTTTCTGCGGAGAATTGCTTATCTCTGTTTCTCAAATGGGCATTTAGGGAAGGTGAAGAAAAAGAACACCCAAATCTAGTGGAAATTGGAAAAGAAATAGTGAAAAAGTGCGGAGGGGTGCCACTAGCACTAAAAACTTCAGGAAGTTCCCTGTTCTCAGTGCTTGATTTAGAAAGATGGGAAAATATGAGAGACCATGAGCTATGGAACCTAAAACAACAGAAAGATGACATTTTACCTTCCCTAAAGTTGAGCTATGATCAAATGCCATCCTATTTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCTAAAGATTTTGGCTTTACCAGTGCTGAAATGGCTAACTTTTGGGTCACACTTGGATTACTTCGATCACCATTTGGAAGTCAGAAGATAGAGAATGTTGGAAAACTATATATAGATGAGTTATATTCAAGATCATTTCTGGAGGACTTTGAGGACTTCGGCACAATGTACTATTTTAAACTACATGATTTGGTACATGATCTTTCGCTGTATGTTGCGAAAGAGGAGTTTCTAATGGTGAACTCCCACACTCACAAAATACCTGAGCAAATAAGGCATATATCAGTTGTTGAAAATGACTCACTAAGCCATACTTTGTTCCCCAAGTTCAGAGGTGTGAGAACTATAATATTTCCCGTTGATGGAGTGGGT 1698 0.3969 MAEYFVFGIAESLLGKLASNLYEEVSRAFDLYEDVQGLRDTLLIVKGMLLDAEEKKEKKHGLREWLRQIQNVCLDAEDVLDGFESKSLRKQVLKASGSTRMKVDHFFSSSNSLVFRFRMARQIKTVRRRLDKIAADGSKFGLERIDIDHSRLQRREMTYSHVDASRVIGREKNREEIMKLLMQPLLHGDGYGDQSVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFPLKMWVCISDDFDIRQIIVKIINSASDPTISVVHQESINNLDIEQLQSRLRHKLSYQKFLLVLDDVWNEDRSKWIELKDLIKVGASGSKIIVTTRSHSIASMMGTVPSYVLEGLSAENCLSLFLKWAFREGEEKEHPNLVEIGKEIVKKCGGVPLALKTSGSSLFSVLDLERWENMRDHELWNLKQQKDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFGFTSAEMANFWVTLGLLRSPFGSQKIENVGKLYIDELYSRSFLEDFEDFGTMYYFKLHDLVHDLSLYVAKEEFLMVNSHTHKIPEQIRHISVVENDSLSHTLFPKFRGVRTIIFPVDGVG 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1383 566 Gene3D - 10 124 - -
Pvu1g1383 566 PANTHER OS08G0543100 PROTEIN 27 535 - -
Pvu1g1383 566 PANTHER DISEASE RESISTANCE PROTEIN RP 27 535 IPR044974 GO:0006952
Pvu1g1383 566 Gene3D - 150 334 IPR027417 -
Pvu1g1383 566 CDD RX-CC_like 8 134 IPR038005 -
Pvu1g1383 566 Gene3D - 339 424 IPR042197 -
Pvu1g1383 566 Gene3D - 425 512 IPR036388 -
Pvu1g1383 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 438 IPR027417 -
Pvu1g1383 566 PRINTS Disease resistance protein signature 198 213 - -
Pvu1g1383 566 PRINTS Disease resistance protein signature 279 293 - -
Pvu1g1383 566 PRINTS Disease resistance protein signature 376 390 - -
Pvu1g1383 566 Pfam Rx N-terminal domain 11 100 IPR041118 -
Pvu1g1383 566 Pfam NB-ARC domain 193 426 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1383 Pvu-Chr1 37550181 37551878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1383 - - pvu:PHAVU_001G1326001 972.23