Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1379 ATGGCCGAATATTTTGTCTTCGAAATTGCTGAATCACTGCTAGGGAAGCTTGCATCTAATCTTTATGAAGAAGTTTCTCGAGCCTTTGATCTATACGAGGATGTGCAAGGTCTGAGAGACACCTTGTTAATTGTAAAAGGCCTGCTGTTGGATGCTGAGGAGAAGAAGGAGAAGAAGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAACGTATGCCTAGATCCGGAAGATTTGTTGGATGGATTTGAGAGCCAAAGCCTGAGAAAACAAGTTCTCAAAGCTTCAGGCAGCACCAGGATGAAGGTAGACCACTTCTTTTCTTCATCTAATTCTCTTGTTTTCCGTTTTAGGATGGCTAGGCAAATAAAAAATGTTAGGCGTAGATTGGATAAGATAGCAGCTGATGGGAGCAAGTTTGGTCTTGAGAAGATTGATATTGATCAAAGCTGTCTGCAAAGGAGAGAAATGACTTATTCTCATGTTGATGCTTCACGGGTTATAGGAAGGGAGAAGAATAGGGAAGAAATTATGAAGCTTTTGATGCAACCTCACCTTCACGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTATTCCCATAGTGGGTATTGGAGGGTTGGGAAAGACCACACTAGCAAAGTTGGTGTTCAATGATAAGAGAATGGATGATCTTTTCCCGTTGAAGATGTGGGTGTGTATTTCTGATGACTTTGACATAAGACAGATAATTGTTAAAATCATCAACTCTGCTTCTGATCCAATCATTTCTGCTGTTCCTCAAGAAAGCATTAACAATTTAGATATTGAGCAGTTACAAAGTCGTCTTAGACATAAACTTTCTTACCAGAAGTATCTACTAGTCTTGGATGATGTATGGAATGAGAATCGTTCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTTGGTGCAATTGGAAGCAAAATCATAGTGACAACACGGAGTCACTCAATTGCTTCCATGATGGGCACTGTTCCCTCGTATGTTTTAGAAGGTCTTTCTGCGGAGAATTGCTTATCTATGTTTCTCAAATGGCCATTTAGGGAAGGTGAAGAAAAAGAACACCCAAATCTAGTGGAAATTGGAAAAGAAATAGTGAAGAAGTGCGGAGGGGTTCAACTAGCACTGAAAACTTCAGGAAGTTCCCTGTTCTCAGTATTTGATTTAGAAAGATGGGAAATTATGAGAGATCATGAGCTGTTGAACCTAAAACAACAGAAAGATGACATTTTACCTTCCTTAAAGTTGAGCTATGATCAAATGCCATCCTATTTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCTAAAGATTTTGCCTTTACCAGTGCTGAAATGGCTAACTTTTGGGTCACACTTGGATTACTTCGATCAGCATTTGGAAGTCAGCAGATAGAGAATGTTGGAAAACTATATATATATGAGTTATATTCAAGATCATTTCTGGAGGACTTTTTGGACTTTGGCACACATTACTATTTTAAACTACATGATTTGGTACATGATCTTTCGCTGTATGTTGCGAAAGAGGAGTTTCTAATGGTGAACTCCCACACTCACAAAATACCTGAGCAAATAAGGCATATATCAGTTGTTGAAAATGACTCACTAAGCCATACTTTGTTCCCCAAGTTCAGAGGTGTGAGAACTATAATATTTCCCGTTGATGGAGTGGGTGTTGGCAGTGAATATCTTTTGGAAACATGGATAAAAAGATACAAATACTTACGTCATTTAGATTTAAGTGATTCCTCTTTTGAGACATTTCCTAATTCAATTGCTAAATTGGAGCATCTGCGAGCTCTCAGTCTTGATAATAATTGCAGCATAAAAAGACTTCCTAATTCTTTTTGCAAACTCCAAAACTTACAAATTTTGTATTTAAGAAGATGCTTGGGCCTTGAAACATTGCCTAAACGATTAGGGATGTTAATCAGCCTCCGAAAATTGTATATAACCACAAAACAGTCTATGTTTCTTCATTCTTTGATTTTTGAATACTGTGACAATTTGAAGTTTTTGTTCCGCGGAGCACAGACACAACTGCCATCCCTTGAAGTTTTGATGATTCAATCATGTGAGAACCTAGAGTCCTTACCTCTTCATCTTCTCCCTAAACTTGAGGTTCTGATTCTAACAAGGTGCGTGATGCTAAATCTGTCCTTGATCAGCGAAAGACCAATCCAAAGATTGATGATTAAAAATTTGTATATTGAGCAATATAAATGCGATTTTTCTTGTAGTGGGCTACATACATTGCCTCAATGGATTCAAGGAGCCTCCAACACTTTGAGAACATTGTCAATTTTAAATTGTCATTGTCTGGAGAAGCTTCCTGAGTGGCTTAACACAATGACTCATCTTAAGATGCTCCATATTATGCATCGTCTAGGAGCCCTTGAAGATTTGATCATAGATGGTTGCCCTGAATTGGGTCAAAAATGTGAACCACAGTCTGGTGAGTACTGGTCCTTTATCGCTCACATCAAATGTGTTTCCATTGGAGAAACAAAGAAAAGGAAACTCCTTTTTCAAATGCTTTCACGACTGCGCTTGAACTGCACTAAGTAA 2592 0.3827 MAEYFVFEIAESLLGKLASNLYEEVSRAFDLYEDVQGLRDTLLIVKGLLLDAEEKKEKKHGLREWLRQIQNVCLDPEDLLDGFESQSLRKQVLKASGSTRMKVDHFFSSSNSLVFRFRMARQIKNVRRRLDKIAADGSKFGLEKIDIDQSCLQRREMTYSHVDASRVIGREKNREEIMKLLMQPHLHGDGYGDQSVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFPLKMWVCISDDFDIRQIIVKIINSASDPIISAVPQESINNLDIEQLQSRLRHKLSYQKYLLVLDDVWNENRSKWIELKDLIKVGAIGSKIIVTTRSHSIASMMGTVPSYVLEGLSAENCLSMFLKWPFREGEEKEHPNLVEIGKEIVKKCGGVQLALKTSGSSLFSVFDLERWEIMRDHELLNLKQQKDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFAFTSAEMANFWVTLGLLRSAFGSQQIENVGKLYIYELYSRSFLEDFLDFGTHYYFKLHDLVHDLSLYVAKEEFLMVNSHTHKIPEQIRHISVVENDSLSHTLFPKFRGVRTIIFPVDGVGVGSEYLLETWIKRYKYLRHLDLSDSSFETFPNSIAKLEHLRALSLDNNCSIKRLPNSFCKLQNLQILYLRRCLGLETLPKRLGMLISLRKLYITTKQSMFLHSLIFEYCDNLKFLFRGAQTQLPSLEVLMIQSCENLESLPLHLLPKLEVLILTRCVMLNLSLISERPIQRLMIKNLYIEQYKCDFSCSGLHTLPQWIQGASNTLRTLSILNCHCLEKLPEWLNTMTHLKMLHIMHRLGALEDLIIDGCPELGQKCEPQSGEYWSFIAHIKCVSIGETKKRKLLFQMLSRLRLNCTK* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1379 863 SUPERFAMILY RNI-like 528 820 - -
Pvu1g1379 863 Gene3D Ribonuclease Inhibitor 517 858 IPR032675 -
Pvu1g1379 863 Gene3D - 425 512 IPR036388 -
Pvu1g1379 863 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 742 - -
Pvu1g1379 863 PRINTS Disease resistance protein signature 198 213 - -
Pvu1g1379 863 PRINTS Disease resistance protein signature 279 293 - -
Pvu1g1379 863 PRINTS Disease resistance protein signature 376 390 - -
Pvu1g1379 863 PRINTS Disease resistance protein signature 687 703 - -
Pvu1g1379 863 PANTHER DISEASE RESISTANCE PROTEIN RP 6 742 IPR044974 GO:0006952
Pvu1g1379 863 Gene3D - 339 424 IPR042197 -
Pvu1g1379 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 438 IPR027417 -
Pvu1g1379 863 Gene3D - 150 334 IPR027417 -
Pvu1g1379 863 CDD RX-CC_like 12 134 IPR038005 -
Pvu1g1379 863 Pfam Rx N-terminal domain 11 100 IPR041118 -
Pvu1g1379 863 Pfam Leucine rich repeat 582 638 IPR001611 GO:0005515
Pvu1g1379 863 Pfam NB-ARC domain 193 426 IPR002182 GO:0043531
Pvu1g1379 863 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1379 Pvu-Chr1 37479691 37486711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1379 - - gmx:100795479 1224.54