Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1376 GAGTTTCTAATGGTGAACTCCCACACTCACAAAATAGCTGAGCAAATAAGGCATATATCAGTTGTTGAAAATGACTCACTAAGCCATACTTTGTTCCCCAAGTTCAGAGGTGTGAGAACTATAATATTTCCCGTTGATGGAGTGGGTGTTGGCAGTGAATATCTTTTGGAAACATGGATAAAAAGATACAAATACTTACGTCATTTAGATTTAAGTGATTCCTTTTTTGAGACACTTCCTAATTCAATTGCTAAATTGGAGCATCTGCGACCTCTCAGTCTTGATAATAATTGTAGCATAAAAAGACTTCCTAATTCTTTTTGCAAACTCCAAAACTTACAAATGTTGTCTTTAAGAAGATGCTTGGGCCTTGAAACATTGCCTAAACGATTAGGGATGTTAATCAGCCTCCGAAAATTGTATATAACCACAAAACAGTGTATTTTGTCAGAGGATGAATTTGCAAGCTTGAACAGTCTTCATTCTTTGATTTTTGAATACTGTGACAATTTGAAGTTTTTGTTCCGAGGAGCACAGGCACAACTCCCATCCCTTGAAGTTTTGATGATTCAATCATGTGCGAACCTAGAGTCCTTACCTCTTCATCTTCTCCCTAAACTTGAGGTTCTGATTGTAACAAGGTGCGTGATGCTAAACCTGTCCTTCAACAGCGAAAGACCAATCCAAAGATTGATGATGAAATATTTGCATATTGAGGAATCTGCACGGCAACAGACATTGCCTCAATGGATTCAAGGAGCCTCCAACACTTTGAGAACATTGTCAATTTCAAATTGTCATTGTCTTGAGATGCTTCCTGAGTGGCTTAACACAATGACTCATCTTAAGATGCTCCGTATTGTTAACTGTCCTCAGTTGTTGCATCTCCCAAGTGACATGCATCGTCTACGAGCTCTTGAAGATTTGATCATAGATGGTTGCCCTGAATTGGGTCGAAAATGTGAACCAGAGTCTGGTGAGTACTGGTCCTTTATCTCTCACATCAAATGTGTTTCCATTGGAGAAACAAAGAAAAGGAAACTCCTTTTTCAAATGCTTTCACGACTGCGCTTGAACTGCACTAAGTAA 1089 0.3875 EFLMVNSHTHKIAEQIRHISVVENDSLSHTLFPKFRGVRTIIFPVDGVGVGSEYLLETWIKRYKYLRHLDLSDSFFETLPNSIAKLEHLRPLSLDNNCSIKRLPNSFCKLQNLQMLSLRRCLGLETLPKRLGMLISLRKLYITTKQCILSEDEFASLNSLHSLIFEYCDNLKFLFRGAQAQLPSLEVLMIQSCANLESLPLHLLPKLEVLIVTRCVMLNLSFNSERPIQRLMMKYLHIEESARQQTLPQWIQGASNTLRTLSISNCHCLEMLPEWLNTMTHLKMLRIVNCPQLLHLPSDMHRLRALEDLIIDGCPELGRKCEPESGEYWSFISHIKCVSIGETKKRKLLFQMLSRLRLNCTK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1376 362 PANTHER LEUCINE-RICH REPEAT-CONTAINING 226 340 - -
Pvu1g1376 362 PANTHER LEUCINE-RICH REPEAT-CONTAINING 54 219 - -
Pvu1g1376 362 SUPERFAMILY L domain-like 14 344 - -
Pvu1g1376 362 PANTHER DISEASE RESISTANCE PROTEIN TAO1-LIKE 226 340 - -
Pvu1g1376 362 PANTHER DISEASE RESISTANCE PROTEIN TAO1-LIKE 54 219 - -
Pvu1g1376 362 Pfam Leucine rich repeat 65 121 IPR001611 GO:0005515
Pvu1g1376 362 Gene3D Ribonuclease Inhibitor 8 361 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1376 Pvu-Chr1 37446255 37447345 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1376 66 210 Miscellaneous Gene Families AT4G39270 31.410 1.13e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1376 - - pvu:PHAVU_001G1325000 718.768