Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1373 ATGGCCGAATATTTTGTCTTCGAAATTGCTGAATCACTGCTGGGGAAGCTTGCATCTAATCTTTATGAAGAAGTTTCTCGAGCCTTTGATCTGTACGAGGATGTGCAAGGTCTGAGAGACACCTTGTTAATTGTAAAGGGCGTGCTCTTGGATGCTGAGGAGAAGAAGGAGAAGAAGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAACGTATGCCTAGATACTGAAGATGTGTTGGATGGATTTGAGTGCCAAAGCCTGAGAAAACAAGTTCTCAAAGCTTCAGGCAGCACCAGGATGAAGGTAGACCACTTCTTTTCTTCATCTAATTCTCTTGTTTTCCGTTTTAGGATGGCTAGGCAAATAAAAAATGTTAGGCGTAGATTGGATAAGATAGCAGCTGATGGGAGAAAGTTTGGTCTTGAGAGGATTGATGTTGAACACAGCCGTCTGCAAAGGAGAGAAATGACTTATTCTCATGTTGATGCTTCAGGGGTTATAGGAAGGGAGAAGGATAGGGAAGAAACTATCAAGCTTTTGATGCAACCTCACCCTCATGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTATTCCCATAGTAGGTTTTGGAGGGTTGGGGAAGACGACACTAGCAAAGTTGGTGTTCAATGATAAGAGAATGGATGATCTTTTCCCGTTGAAGATGTGGGTGTGTATTTCTGATGACTTTGACATAAGGCAGATAGTTGTTAAAATCATCAACTCTGCTTCTGATCCAACCATTTCTGTTGTTCCCCAAGAAAGCATTGACAATTTAGATATTGAGCAGTTACAAAGTCGTCTTAGACACAAACTTTCTTGCCAGAAGTATCTACTAGTCTTGGATGATGTATGGAATGATGATCGTGCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTTGGTGCAATTGGAAGCAAAATCATAGTGACAACACGAAGCCACTCAATTGCTTCCATGATGGGCACTGTTCCCTCGTATGTTTTAGAAGGTCTTTCTGCGGAGAATTGCTTATCTCTGTTTCTCAAATGGGCATTTAAGGAAGGTGAAGAAAAAGAACACCCAAATCTAGTGGAGATTGGAAAAGAAATAGTGAAAAAGTGCGGAGGGGTTCCACTAGCACTGAAAACTTCAGGAAGTTCCCTGTTCTCGGTTTTTGATTTAGAAAGATGGGAAGTTATGAGAGACCATGAGCTATGGAACCTAAAACAACAGGAAGATGACATTTTACCTTCCCTAAAGTTGAGCTATGATCAAATGCCATCCTATTTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCTAAAGATTTTGGCTTTACCAGTGCAGAAATGGCTAACTTTTGGGTCACACTTGGATTACTTCGATCACCATTTGGAAGTCAGAAGATAGAGAATGTTGGAAAACTATATATATATGAGTTATATTCAAGATCATTTCTGGAGGACTTTGAGGACTTTGGCACAGTGTACTATTTTAAACTACATGATTTGGTACATGATCTTTCGTTGTATGTTGCTAAAGAGGAGTTTCTAATGGTGAACTCCCATACTCGCAAAATACCTGAGCAAGTAAGGCATATATCAGTCGTTGAAAATGACTCACTAAGCCATACTTTGTTCCCCAAGTTCAGAGGTGTGAGAACTATAATATTTCCCGTTGATGGAGTGGGTGTTGGCAGTGAATATCTTTTGGAAACATGGATAAAAAGATACAAATACTTACGTCATTTAGATTTAAGTGATTCCTTTTTTGAGACACTTCCTAATTCAATTGCTAAATTGGAGCATCTGCGAGCTCTCAGTCTTGATAATAATTGTAGCATAAAAAGACTTCCTAATTCTTTTTGCAAACTCCAAAACTTACAAATGTTGTCTTTAAGAAGATGCTTGGGCCTTGAAACATTGCCTAAACGATTAGGGATGTTAATCAGACTCCGAAAATTGTATATAACCACAAAACAGTCTATTTTGTTAGAGGATGAGTTTGCAAGCTTGAACAGTCTCCATACTTTGATTTTTGAATACAGTGACAATTTGAAGTTTTTGTTCCAAGGAGCACAAGCACAACTCCCATCCCTTAAAGTTTTGATCATTCAATCATGTGGGAACCTAGAGTCCTTACCTCTTCATCTTCTCCCTAAACTTGAGGTTCTGATTGTAACAAGGTGCGTGATGCTAAACCTGTCCTTCAACAGCGAAAGACCAATCCAAAGATTGATGATGAAATATTTGCATATTGAGCAATGTGCACGGCAACAGACATTGCCTCAATGGATTCAAGGAGCCTCCAACACTTTGAGAACATTGTTAATTTCAAATTTTCATTGTCTTGAGAAGCTTCCTGAGTGGCTTAACACAATGACTGATCTTAAGATGCTCCATATTGTTAACTGTCCTCAGTTGTTGCATCTTCCAAGTGAGATGCATCGTCTACGAGCCCTTGAAGATTTGATCATAGATGGTTGCCCTGAATTGGGTCGAAAATGTGAACCACAGTCTGGTGAGTACTGGTCCTTTATCTCTCACATCAAATGTGTTTCCATTGGAGAAACAAGAAAAAGGAAACTCCTTTTTCAAATGCTTTCACGACTGCGCTTGAAATGCACTTAG 2637 0.3936 MAEYFVFEIAESLLGKLASNLYEEVSRAFDLYEDVQGLRDTLLIVKGVLLDAEEKKEKKHGLREWLRQIQNVCLDTEDVLDGFECQSLRKQVLKASGSTRMKVDHFFSSSNSLVFRFRMARQIKNVRRRLDKIAADGRKFGLERIDVEHSRLQRREMTYSHVDASGVIGREKDREETIKLLMQPHPHGDGYGDQSVCVIPIVGFGGLGKTTLAKLVFNDKRMDDLFPLKMWVCISDDFDIRQIVVKIINSASDPTISVVPQESIDNLDIEQLQSRLRHKLSCQKYLLVLDDVWNDDRAKWIELKDLIKVGAIGSKIIVTTRSHSIASMMGTVPSYVLEGLSAENCLSLFLKWAFKEGEEKEHPNLVEIGKEIVKKCGGVPLALKTSGSSLFSVFDLERWEVMRDHELWNLKQQEDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFGFTSAEMANFWVTLGLLRSPFGSQKIENVGKLYIYELYSRSFLEDFEDFGTVYYFKLHDLVHDLSLYVAKEEFLMVNSHTRKIPEQVRHISVVENDSLSHTLFPKFRGVRTIIFPVDGVGVGSEYLLETWIKRYKYLRHLDLSDSFFETLPNSIAKLEHLRALSLDNNCSIKRLPNSFCKLQNLQMLSLRRCLGLETLPKRLGMLIRLRKLYITTKQSILLEDEFASLNSLHTLIFEYSDNLKFLFQGAQAQLPSLKVLIIQSCGNLESLPLHLLPKLEVLIVTRCVMLNLSFNSERPIQRLMMKYLHIEQCARQQTLPQWIQGASNTLRTLLISNFHCLEKLPEWLNTMTDLKMLHIVNCPQLLHLPSEMHRLRALEDLIIDGCPELGRKCEPQSGEYWSFISHIKCVSIGETRKRKLLFQMLSRLRLKCT* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1373 878 PANTHER DISEASE RESISTANCE PROTEIN RP 6 749 IPR044974 GO:0006952
Pvu1g1373 878 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 749 - -
Pvu1g1373 878 Gene3D - 425 512 IPR036388 -
Pvu1g1373 878 PRINTS Disease resistance protein signature 198 213 - -
Pvu1g1373 878 PRINTS Disease resistance protein signature 279 293 - -
Pvu1g1373 878 PRINTS Disease resistance protein signature 376 390 - -
Pvu1g1373 878 PRINTS Disease resistance protein signature 697 713 - -
Pvu1g1373 878 Gene3D - 10 124 - -
Pvu1g1373 878 Gene3D Ribonuclease Inhibitor 519 874 IPR032675 -
Pvu1g1373 878 CDD RX-CC_like 12 134 IPR038005 -
Pvu1g1373 878 Pfam NB-ARC domain 195 426 IPR002182 GO:0043531
Pvu1g1373 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 438 IPR027417 -
Pvu1g1373 878 Pfam Rx N-terminal domain 11 100 IPR041118 -
Pvu1g1373 878 Gene3D - 150 334 IPR027417 -
Pvu1g1373 878 SUPERFAMILY L domain-like 502 864 - -
Pvu1g1373 878 Gene3D - 339 424 IPR042197 -
Pvu1g1373 878 Pfam Leucine rich repeat 582 638 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1373 Pvu-Chr1 37402095 37404759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1373 583 727 Miscellaneous Gene Families AT4G39270 31.410 3.31e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1373 - - gmx:100794422 1320.84