Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1372 ATGGCTTCTTTAGTATCTTCATCATTTACTCTACCTAGCTCTAAACCTGACCAGCTTCATTCTCTTGCCCAAAAGCATCTTTTTCTTCATTCTTTCCTTCCCAAGAAAACTGGTTATAATGGTAGCTCAAAATCCTCTCTGAGAGTGAAATGTATTGGCAATGGTCTATTCACCCAAACCACCCAAGAAGTTCGTAGAATAATTCCTGAGAATGACCAAAACTTGCCAACAGTTAAAATTGTGTATGTGGTCCTTGAGGCTCAGTACCAGTCATCTCTCACTGCTGCAGTCCTGGCTCTCAACAGTAAAAGGAAACATGCTTCCTTTGAGGTTGTGGGTTACTTGGTTGAGGAGCTTCGAGACGCCTCAACGTATAAGGCTTTCTGCAAGGACTTGGAGGATGCTAACGTCTTCATTGGGTCTTTGATTTTTGTGGAGGAGCTTGCTCTCAAGATCAAGACTGCAGTGGAGAAAGAAAGGGACAGGCTTGATGCGGTCTTGGTGTTTCCATCAATGCCTGAAGTGATGAGGCTTAACAAGTTGGGTTCTTTCAGCATGTCACAACTTGGGCAATCTAAGAGTCCCTTTTTCCAGCTTTTCAAGAGAAAGAAGCCTCAGTCTGCTGGCTTTGCCGACAGCATGTTGAAGCTCGTGAGGACATTGCCAAAGGTTTTGAAGTATTTGCCAAGTGATAAAGCTCAGGATGCCAGGCTCTACATACTGAGTCTGCAATTTTGGCTTGGGGGATCTCCTGATAACTTGCAGAATTTCCTGAAAATGATTACTGGATCTTATATTCCAGCACTGAAAGGTGCAAAGATCGAGTATTCGGAGCCGGTTTTGTACTTGGACAATGGGATTTGGCACCCTTTGGCTCCTTGTATGTATGATGATGTGAAGGAGTATTTGAATTGGTATGGTACCAGAAGGGATGCAAATGAGAAGCTGAAATCCCCGAATGCACCCGTCATTGGTTTGGTTTTGCAAAGGAGTCATATTGTGACTGGTGATGAAGGACACTATGTGGCTGTGATCATGGAGATGGAGGCTAGAGGGGCTAAGGTCATTCCCATTTTTGCTGGCGGACTTGACTTTTCAGGGCCAGTGGAGAAGTTCTTCATTGATCCAATTACGAAGAAACCATTTGTGAATTCTGTGGTATCCCTCACTGGCTTTGCTCTTGTTGGAGGGCCAGCAAGGCAGGACCATCCAAGGGCGGTTGAGGCTTTGATGAAACTTGATGTTCCTTACATTGTTGCCCTGCCACTGGTGTTTCAGACAACAGAAGAATGGCTCAACAGTACTCTTGGTGTGCATCCAATACAGGTTGCTCTTCAAGTTGCTCTGCCAGAGCTAGATGGAGGCATGGAGCCAATTGTTTTCGCTGGTCGAGATCCTAAAACAGGAAAATCTCATGCTCTTCATAAGAGAGTGGAACAACTCTGCGTCAGGGCAATCAAATGGGCTGAATTGAAAAGAAAATCAAAGGAAGAGAAGAAACTAGCAATCACCGTCTTCAGTTTCCCTCCGGACAAAGGAAATGTGGGAACTGCTGCCTATCTCAATGTCTTTGCCTCTATATACTCAGTTATGAAAGAACTAAAAAGAGATGGTTATAACGTTGAAGGCCTTCCAGAGACTCCAGAAGCTTTGATTGAAGAAGTAATTCATGACAAAGAAGCTCAATTCAGTAGTCCAAATTTGAACATTGCTTACAAAATGAACGTCCGAGAGTACCAAAATTTGACTCCCTATTCCACGGCACTGGAAGAGAATTGGGGAAAACCCCCTGGCAATTTGAATGCAGATGGAGAAAATCTGTTGGTATATGGGAAACAATATGGTAATATCTTCATAGGTGTTCAGCCTACATTTGGCTATGAAGGGGATCCAATGAGGCTGCTTTTCTCCAAATCTGCCAGCCCTCATCATGGATTTGCAGCATTTTATTCCTATGTTGAGAAAATCTTCAAAGCTGATGCTGTTCTTCATTTTGGGACACATGGTTCCCTTGAATTCATGCCTGGAAAACAGGTGGGGATGAGTGATGCATGTTATCCCGACAGTCTAATTGGTAATATTCCAAATGTGTATTACTATGCTGCAAACAACCCTTCCGAGGCTACCATAGCCAAGCGCAGAAGTTATGCAAACACCATTAGCTATCTGACTCCTCCTGCAGAAAATGCTGGACTATACAAAGGTCTTAAGCAGTTAAGTGAGCTCATCTCCTCATATCAGTCCCTCAAAGACACTGGTCGTGGGGCACAAATTGTGAGTTCAATTATCAGCACAGCTAGACAGTGTAATCTTGACAAAGATGTGACATTGCCAGATGAGGGTGTGGAGATCTCACCTAAAGAGCGCGATCTGGTGGTTGGAAAGGTGTATTCCAAGATCATGGAGATTGAGTCTCGTCTGTTACCTTGTGGGCTTCATATCATTGGTGAGCCTCCCTCAGCTTTGGAAGCAGTCGCTACACTGGTGAACATTGCTGCACTTGATCGTCCTGAAGATGGTATTTCTTCTCTTCCAGGAATATTAGCTGACACTGTAGGAAGAGATATAGAAGATGTGTATAGAGGCAGTAACAAAGGAATATTGAAGGATGTAGAGCTTCTTAGGCAAATAACAGAGGCATCACGTGGAGCAATCACTGCCTTTGTGGAGCGCACTACCAATGATAAGGGTCAAGTTGTTGATGTAGCTGGTAAGCTTACCTCAATCCTGGGATTTGGCATAAATGAGCCATGGATTCAGTACTTGTCAGACACCAAGTTTTATCGAGCTGATAGGGAAAAACTTAGAACCTTGTTTATGTTCCTGGGAGACTGCTTGAAGTTGGTTGTGGCTGATAATGAAGTGGGAAGTTTAAAGCAAGCCTTGGAAGGTAAATATGTGGAGCCAGGGCCTGGTGGTGATCCAATAAGAAATCCTAAAGTTTTGCCAACAGGAAAGAATATTCATGCCCTGGACCCACAAGCTATTCCTACAACTGCTGCAATGCAGAGTGCCAAAATAGTGGTAGAGAGGTTGATTGAAAGGCAGAAGGCTGAGAACGGTGGAAAATATCCCGAGACAATTGCACTTGTATTGTGGGGAACTGATAATATTAAAACATATGGTGAATCACTGGGTCAAGTCTTGTGGATGATTGGTGTGATGCCAGTGGCTGATGCTTTTGGCAGGGTAAACCGGGTGGAACCCGTCAGTCTTGAAGAGCTTGGAAGGCCTAGGATTGATGTTGTTGTTAATTGCTCAGGAGTGTTTAGAGACCTTTTCATCAATCAGATGAACCTTCTAGACAGAGCAGTGAAGATGGTTGCTGAATTAGATGAACCAGCAGAGCAAAACTATGTAAGAAAGCATGCGTCAGAACAAGCTCAAGCCCTTGGAGTTGATGTTCGAGAAGCAGCAACAAGGATCTTCTCCAACGCCTCCGGCTCCTACTCCTCAAACATAAACCTGGCTGTGGAGAATTCTTCATGGAATGATGAGAAGCAGCTTCAGGACATGTATCTTAGCAGAAAGTCTTTTGCTTTTGATTCTGATGCCCCTGGTGCTGGCATGACTGAGAAAAGAAAAGTCTTTGAGATGGCTCTAAGCACAGCAGATGCCACATTCCAAAACCTTGATTCATCAGAAATTTCCCTCACTGATGTTAGTCATTACTTTGACTCAGACCCAACTAATCTGGTTCAAAATCTAAGGAAAGATGGGAAAAAGCCCAGTGCATACGTTGCCGATACAACTACTGCTAATGCTCAGGTACGCACACTTTCTGAGACAGTTAGACTTGACGCAAGAACCAAACTGTTGAACCCAAAGTGGTATGAAGGCATGCTGTCTACTGGATATGAGGGTGTTCGTGAGATTGAGAAGAGACTAACCAACACAGTGGGATGGAGTGCAACTTCAGGCCAAGTTGACAACTGGGTGTACGAAGAAGCCAACACAACATTCATTCAAGATGAGAAAATGCTGAACAAGCTCATGAACACTAATCCAAACTCCTTCAGGAAGCTGGTGCAGACTTTCTTGGAAGCCAATGGACGTGGTTACTGGGAAACTTCAGAAGACAATATTGAGAAGCTCAAGCAGTTGTATTCGGAGGTGGAAGACAAAATTGAAGGCATTGATCGTTGA 4146 0.4402 MASLVSSSFTLPSSKPDQLHSLAQKHLFLHSFLPKKTGYNGSSKSSLRVKCIGNGLFTQTTQEVRRIIPENDQNLPTVKIVYVVLEAQYQSSLTAAVLALNSKRKHASFEVVGYLVEELRDASTYKAFCKDLEDANVFIGSLIFVEELALKIKTAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKPQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMITGSYIPALKGAKIEYSEPVLYLDNGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPNAPVIGLVLQRSHIVTGDEGHYVAVIMEMEARGAKVIPIFAGGLDFSGPVEKFFIDPITKKPFVNSVVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGVHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCVRAIKWAELKRKSKEEKKLAITVFSFPPDKGNVGTAAYLNVFASIYSVMKELKRDGYNVEGLPETPEALIEEVIHDKEAQFSSPNLNIAYKMNVREYQNLTPYSTALEENWGKPPGNLNADGENLLVYGKQYGNIFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAFYSYVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGAQIVSSIISTARQCNLDKDVTLPDEGVEISPKERDLVVGKVYSKIMEIESRLLPCGLHIIGEPPSALEAVATLVNIAALDRPEDGISSLPGILADTVGRDIEDVYRGSNKGILKDVELLRQITEASRGAITAFVERTTNDKGQVVDVAGKLTSILGFGINEPWIQYLSDTKFYRADREKLRTLFMFLGDCLKLVVADNEVGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVERLIERQKAENGGKYPETIALVLWGTDNIKTYGESLGQVLWMIGVMPVADAFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEQNYVRKHASEQAQALGVDVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDSDAPGAGMTEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYVADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEKMLNKLMNTNPNSFRKLVQTFLEANGRGYWETSEDNIEKLKQLYSEVEDKIEGIDR* 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1372 1381 Pfam CobN/Magnesium Chelatase 244 1361 IPR003672 GO:0009058
Pvu1g1372 1381 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 81 1380 IPR003672 GO:0009058
Pvu1g1372 1381 Coils Coil 1355 1381 - -
Pvu1g1372 1381 Pfam Domain of unknown function (DUF3479) 79 240 IPR022571 GO:0016851
Pvu1g1372 1381 CDD CobN_like 154 1252 IPR003672 GO:0009058
Pvu1g1372 1381 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 81 1380 - -
Pvu1g1372 1381 TIGRFAM BchH: magnesium chelatase, H subunit 79 1379 IPR011771 GO:0015995|GO:0016851
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1372 Pvu-Chr1 37394733 37401486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1372 K03403 - gmx:100787735 2636.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1372 1 37394733 37401486 Pvu1g1372 1 37394733 37401486 ECH
Pvu1g1372 1 37394733 37401486 Pvu7g2601 7 49124342 49130531 PCT