Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1365 ATGGCCAGCACCGGAACTCACTGTCTCCAACTCCCCGGCGCCGCCGCGTCGACTCACCGGAGAACCTCCATTTCGTGCAAGAAGAAAACGGATAAGATTGCATTCAAGGAAACGAAAGAAGGCTTCGTGGACTACGACCTAGGACTGCACGAGGTCTCTACCAAAATCTCCGGCCTCCGCAAGGACAACATCGCTACCCACTACCGCCTCCGTGTCGCCGGAAACCGCTTCCAGAAGGACTGGACGGTGTCCGAGGTCGCCGACCTCGTCCTCTCGCTCGACCTCTCCGACGACATCGACGGCCTACTCAACCGTTGGATAGGCCGCTTCGCACGCAAGAACTTTCCCTACCTTATTAAGGAGTTGACGCAGCGAGGGTCCATTGGACACTGTAATCGCGTATTCAGGTGGATGAAGTACCAGAGAAACTACTGTGCGCGCAATGATATATACAACATGATGATTAGGTTGCACGCTCGCCACAATCGAACGGACCATGCACGTGGATTGTTTTTCGAGATGCAGGAATGGAGGTGTAAACCGGATGTTGAGACTTATAATGCTCTTATCAACGCACATGGTCGAGCTGGACAGTGGCGTTGGGCTTTGAATATCATGGATGACATGCTGCGTGCAGCTATTCCACCGAGTAGATATACCTATAACAACTTGATAAATGCTTGTGGATCTAGTGGGAATTGGAAAGAAGCACTCAACGTTTGCAAGAAAATGACAGAACACGGTGTCGGGCCTGATCTTGTTACTCACAATATTATTCTATCTGCATTTAAAAGTGGCGCTCAGTATTTGAAAGCTCTGTCATATTTTGAACTAATGAAGGGAACTCATATTCGTCCTGACACAACGACACTTAATATTATTATCCATTGTCTAGTAAAGCTTCAACAATATGACAAAGCTATTGATATTTTTAATTCCATGAGGGAGAAGAAATCAGAATGTACCCCTGATGTTGTTACATTCACAAGTATCATTCACTTGTATTCTGTGTGTGGACAAGTTGATAATTGTGAGGCTGCATTCAATATGATGCTTGCAGAAGGGCTGAAACCTAATATAGTCTCATATAATGCACTAATTGGTGCATATGCTGCTTGTGGGATGGACAATGAGGCACTTTTGGTTTTCAATGAGATAAAAGGAAATGGTTTTCGGCCTGATGTTGTATCTTATACGTCTCTCCTTAATGCTTATGGAAGGTCACAAAAACCCCAAAAAGCAAGGGAAATATTTGATATGATGAAGACAAACAAGTTGAAGCCAAACCTTGTCAGTTACAATTCACTGATCGATGCCTATGGATCTAGTGGTTTTCTGACAGATGCAATTGAAGTCTTGCGAGAAATGGAACAAGATGGAATTCAACCAAATGTTGTTTCAATATGCACACTCTTGGCTGCCTGCGGACGATGCAGTCGGAAGGTGAAGATTGACACAGTGCTAACAGCAGCTAAGATGCGAGGAATTAAGTTAAACACAGTTGCTTATAATTCTGCTATAGGGAGCTATATGAATGTAGGGGAATATGACAAAGCTATAAACTTGTATAAATCTATGAGGAAGAAAAAAATTAAAACTAATTCTGTTACTTACACTGTGTTGATAAGTGGTTGTTGTAAGATGTCAAAATATGGTGAAGCCCTATCTTTTATGAAAGAAATGATGCATCTAAAACTTCCTTTGACCAAAGAGCTCTACTCTTCTGTCATATGTGCCTATAGCAAACAGGGTCAAATTGAAGAAGCAGAATCTACATTTAACTTGATGAAATCATCTGGTTGTTACCCTGATGTGGTTACATACACCTCCATGCTTGATGCCTACAGTGCAGCTGGCAATTGGGAGAAAGCCTATGCACTCTTTGAAGAAATGGAAGCAAGTGACATCAAGCTAGATACCATTGCCTGTGCAGCTCTAATGAGATCTTTTAATAAAGGTGGTCAACCGGGAAGGGTTCTTAATCTTGCAGAAAGCATGAGAGAAAAAGAAATTCCTTTCACTGATACTATATTTTTTGAAATGGTATCAGCCTGTAGCATATTACAAGATTGGAGGACAGCTGTTGATTTGATCAAGTACATAGAGTCCTCACTTCCTGTAATTTCATCCGGGTGTTTGAATCAGTTCCTGCATTCTTTAGGAAAAAGTGGAAAGATTGAAACTATGTTGAAGTTATTCTTCAAAATCTTGGCATCGGGTATTGATGTTAACTTAAACACTTACTCTATTTTATTGAAGAACCTTTTATCATCTGGAAATTGGAGGAAGTATTTAGAGGTATTGCAATGGATGGAGGATGCAGGAATTCATCCATCAAATGAAATGTACCACGATATATCTGCGTTTTCTCAAAAATGCTGTGGGCACGAAAATGCTGCTGTTATAAAAGAAAGACTTGAATCCTTGAAAAGAAAATCTGAGGATCAAATTTCTGCCAACCGACCAGGTGAAACTCCTGTTCTTAGTTGA 2490 0.4165 MASTGTHCLQLPGAAASTHRRTSISCKKKTDKIAFKETKEGFVDYDLGLHEVSTKISGLRKDNIATHYRLRVAGNRFQKDWTVSEVADLVLSLDLSDDIDGLLNRWIGRFARKNFPYLIKELTQRGSIGHCNRVFRWMKYQRNYCARNDIYNMMIRLHARHNRTDHARGLFFEMQEWRCKPDVETYNALINAHGRAGQWRWALNIMDDMLRAAIPPSRYTYNNLINACGSSGNWKEALNVCKKMTEHGVGPDLVTHNIILSAFKSGAQYLKALSYFELMKGTHIRPDTTTLNIIIHCLVKLQQYDKAIDIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVDNCEAAFNMMLAEGLKPNIVSYNALIGAYAACGMDNEALLVFNEIKGNGFRPDVVSYTSLLNAYGRSQKPQKAREIFDMMKTNKLKPNLVSYNSLIDAYGSSGFLTDAIEVLREMEQDGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAKMRGIKLNTVAYNSAIGSYMNVGEYDKAINLYKSMRKKKIKTNSVTYTVLISGCCKMSKYGEALSFMKEMMHLKLPLTKELYSSVICAYSKQGQIEEAESTFNLMKSSGCYPDVVTYTSMLDAYSAAGNWEKAYALFEEMEASDIKLDTIACAALMRSFNKGGQPGRVLNLAESMREKEIPFTDTIFFEMVSACSILQDWRTAVDLIKYIESSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKILASGIDVNLNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSNEMYHDISAFSQKCCGHENAAVIKERLESLKRKSEDQISANRPGETPVLS* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1365 829 Pfam PPR repeat family 499 547 IPR002885 -
Pvu1g1365 829 Pfam PPR repeat family 181 228 IPR002885 -
Pvu1g1365 829 Pfam PPR repeat family 573 615 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 287 321 IPR002885 -
Pvu1g1365 829 Gene3D Tetratricopeptide repeat domain 647 823 IPR011990 GO:0005515
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 324 358 IPR002885 -
Pvu1g1365 829 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 22 787 - -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 604 638 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 394 428 IPR002885 -
Pvu1g1365 829 Pfam Pentatricopeptide repeat domain 382 441 IPR002885 -
Pvu1g1365 829 Pfam Pentatricopeptide repeat domain 322 370 IPR002885 -
Pvu1g1365 829 Pfam Pentatricopeptide repeat domain 447 476 IPR002885 -
Pvu1g1365 829 Pfam Pentatricopeptide repeat domain 735 780 IPR002885 -
Pvu1g1365 829 Pfam Pentatricopeptide repeat domain 627 671 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 429 463 IPR002885 -
Pvu1g1365 829 Gene3D Tetratricopeptide repeat domain 387 458 IPR011990 GO:0005515
Pvu1g1365 829 Gene3D Tetratricopeptide repeat domain 566 638 IPR011990 GO:0005515
Pvu1g1365 829 Gene3D Tetratricopeptide repeat domain 82 245 IPR011990 GO:0005515
Pvu1g1365 829 Gene3D Tetratricopeptide repeat domain 317 386 IPR011990 GO:0005515
Pvu1g1365 829 Gene3D Tetratricopeptide repeat domain 246 316 IPR011990 GO:0005515
Pvu1g1365 829 Gene3D Tetratricopeptide repeat domain 459 565 IPR011990 GO:0005515
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 147 181 IPR002885 -
Pvu1g1365 829 PANTHER OS07G0213300 PROTEIN 22 787 - -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 569 603 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 217 251 IPR002885 -
Pvu1g1365 829 SUPERFAMILY TPR-like 183 353 IPR011990 GO:0005515
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 252 286 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 744 778 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 534 568 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 499 533 IPR002885 -
Pvu1g1365 829 SUPERFAMILY TPR-like 287 631 IPR011990 GO:0005515
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 182 216 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 572 605 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 431 465 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 501 534 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 290 321 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 185 217 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 219 252 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 606 640 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 361 395 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 396 429 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 326 360 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 536 566 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 150 183 IPR002885 -
Pvu1g1365 829 TIGRFAM PPR: pentatricopeptide repeat domain 254 288 IPR002885 -
Pvu1g1365 829 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 359 393 IPR002885 -
Pvu1g1365 829 Pfam PPR repeat 290 317 IPR002885 -
Pvu1g1365 829 Pfam PPR repeat 150 179 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1365 232 787 Glycosyltransferase AT1G05670 23.878 1.24e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1365 - - gmx:100814643 1476.84