Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1364 ATGGGAAAAATGTTCAAATCTACTACCAAGTCTTCACCACCTGTTGCAGACTCTGCTGTTCCTGACTCTGCTGTTCGCAAAGACCATGTTGTGGCTGATCATGACACTGATAAATGTATCATGATTGGTAGTATTCCAGTATTGCTATCTAAAAAGTCACCTAGTTGCAATTCAATTGGTGACAAACAACACCCTGAGTCAATGTCTAATTCTAATCATTCAATTTCCTCGTCAAGGAACGCCACTAATGTTTTTAACCCAAGAAATTCCAAGAGGAAAACTCGAGTTCATTTAGAATCTGCCTTCAGTGGAGAAAAATACAGTGTACCAAGCTCCAATTTTGAAATTTCTAAGTTACCACTTCCAAACAAAGTTTCCGAGACTAACTTGTCAACTCCCCAAGATGAATCACTTCAAAGTAGTAAATATTGGTGGAAGAAACCTGATTCTTTTAATAGACCTCATAATAGTAACACCAATTCAAACTACGCTGCAGTTGGTGCTCCCAAGTTGAATTCTTCAGTTAACAAGCTACAGTTCAGACCATATGACATTTGCACTCATGGAAGAAGAAATCATGTTTTAATAGGAGCTACTTTGCCTGGAGAAAACAAGGAAGGTAGATTTGAGATGCAGGAGGAAAAGACAGAAGGGTTTGTGTTGAGGCCTGGGATGGTTCTCTTGAAAAATTTCATAAGCCATGATGATCAGGTGGGGATAGTGAAAGTTTGTCGGAAACTTGGTCTAGGCCCTGGAGGATTCTATCAACCAGGATATGCAAATGGAGCAAAACTTCGATTAAAGATGATGTGTCTTGGTATGGATTGGGATCCTCAGACCTATAAATATGGAACCAAACGAGCATTTGATGATAGCACCCCACCAAGTATTCCCAATCAATTCAGTGAACTAGTAGCACGATCAATCCAAAAAGCTCAATCTCTAACTAAAGAGGAATATAGAGTTCATGATGTGAACGATGTTCTTCCTTCAATGACTCCTGACATCTGCATAGTAAATTTTTATACAAACTATGGAAAGCTTGGTCTTCATCAAGATCGTGATGAAAGCAAAGAAAGTCTTCGAAAAGGGTTGCCTGTTGTGTCCTTCTCTATTGGTGATTCTGCAGATTTTCTTTATGGGGATGAGAGGAATGAAGAGGAGGCAGAGGCTGTAATTCTAGATTCTGGAGATGTGTTGATATTTGGTGGTGAATCTCGACATGTTTTCCATGGTGTGCCATCAGTTTTACCAAAGTCAGCTCCAAAACAATTGTTGAGAGATTCTAATCTTTCTCCTGGTCGACTCAATCTTACATTCAGACAATATTAA 1332 0.3919 MGKMFKSTTKSSPPVADSAVPDSAVRKDHVVADHDTDKCIMIGSIPVLLSKKSPSCNSIGDKQHPESMSNSNHSISSSRNATNVFNPRNSKRKTRVHLESAFSGEKYSVPSSNFEISKLPLPNKVSETNLSTPQDESLQSSKYWWKKPDSFNRPHNSNTNSNYAAVGAPKLNSSVNKLQFRPYDICTHGRRNHVLIGATLPGENKEGRFEMQEEKTEGFVLRPGMVLLKNFISHDDQVGIVKVCRKLGLGPGGFYQPGYANGAKLRLKMMCLGMDWDPQTYKYGTKRAFDDSTPPSIPNQFSELVARSIQKAQSLTKEEYRVHDVNDVLPSMTPDICIVNFYTNYGKLGLHQDRDESKESLRKGLPVVSFSIGDSADFLYGDERNEEEAEAVILDSGDVLIFGGESRHVFHGVPSVLPKSAPKQLLRDSNLSPGRLNLTFRQY* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1364 443 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 333 443 IPR005123 -
Pvu1g1364 443 SUPERFAMILY Clavaminate synthase-like 221 443 - -
Pvu1g1364 443 Pfam 2OG-Fe(II) oxygenase superfamily 224 441 IPR027450 -
Pvu1g1364 443 MobiDBLite consensus disorder prediction 55 89 - -
Pvu1g1364 443 PANTHER 2OG-FE(II) OXYGENASE FAMILY PROTEIN 57 443 - -
Pvu1g1364 443 MobiDBLite consensus disorder prediction 55 92 - -
Pvu1g1364 443 MobiDBLite consensus disorder prediction 1 16 - -
Pvu1g1364 443 Gene3D - 219 443 IPR037151 -
Pvu1g1364 443 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 57 443 IPR004574 -
Pvu1g1364 443 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1364 Pvu-Chr1 37245960 37248456 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1364 - - var:108346577 575.859