Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1358 ATGTTTTTGCAGTCTTATGTTACTCAAGAAGATTATTTCTTGGGAACTCTAACAGTGAAGGAAACCCTCACATATGCAGCTCGTTTGAGACTTCCTTCTGATATGAGCAGAAATGAGATTAACAAGGTGGTAACCAATGTATTAGCTGAAATGGGTCTGGAAGATAGTGCGGAAAGCAGACTTGGGAATTGGCATTTGAGAGGAATAAGTAGCGGAGAGAAAAGAAGGCTTAGCATAGGCATTGAGATCTTAACTCAACCTCGTGTAATGTTTCTGGATGAACCCACTAGTGGCTTGGATAGTGCAGCCTCTTTCTATGTGATTTCTTCTCTATCAAACATAGCACATGATGGACGAATAGTCATATGCTCCATTCACCAGCCCAGTGGTGAAGTCTTCAACCTTTTTGATGATCTGGTCCTCCTTGCTGGAGGTGAAGCTGTATACTTTGGACAAGCAACAATGGCTGTAAAGTTCTTTGCTGATGCAGGATTTCCTTGTCCAACCCGAAGGAATCCTCCTGAGCATTTCCTTCGTTGTGTTAGCCCAGAGTTCGATAGTATTGCACCCTTAATACCTTCTAAAAGTGAAAACAATGCCTCATCGTCGTGGAATTCTCTAATGAATATGACGGCAGAGGAGATTAAATCGGAACTGGTAATGAACTACAAGAACTCCATACTTTCAGAAAATGCAAGGAAAAAGATCAGAGAAATGAAAAAAAGTTTGCAGGAAGAACCTTTAGTTGGGAAAATATATGATACCAGCTGGCTGAATCAGCTATGCACATTGACAGATAGATCCTTCCTAAATATGAGCCGAGACTTTGGTTACTATTGGCTTAGGATTGTATTCTATATCATGATGTCAGTGAGTGCTGGTGTTCTTCTTTTCAACATAGGAACAAGTAATGAAGCAATCATGACTAGAGGCAAATGTGATGGATTCGTCTTTGGCTTAATGATCTTTCTGTGTTTAGGTGGCGTACCCTTTTACCATGAGGAATTAAAGGTCTTCAAACGTGAAAGGTTTGGAAAGCATTATGGGGAGGCCATCTTTATACTCTCACATTTCCTCTCATCATTGCCTTTTGTTCTTGCAATATCCGTCTCTTCAGGAACAATAATTTACCACATGGTGAACTTTCATAAAGGCTTCTCTCATTACTTCTACTTCTGCATGAATATATTTAGCTTCATTTCTGCCACAGAGGGCTGCACATTATTCGTTGCAGCACTAGCACCCGACCTATTGGTAGCAATTGGAACTGCAACTGGTGTAATTGTATTCATGATGGTGCCATCTAACGTATTCAGAAGTCTAGCAGACCTTCCAAAGTTCTTTTGGCGCTATCCAATGTCCTATCTCAGCTACATTACATGGTCAATACAGGGTCAATTCAAGAATGACCTGATTGGTCTTGAATTTGAACCACAGATGGGTGGGGATGCCAAGATAAAGGGTGAATACATACTTGATGCTATGTTTGGAATTAGGACTGATTATTCAAAATGGTGGGACTTAGGAGTCGTAGTTTGCTTCTTGATAAGCTATAGAGTGCTGTATTACTTGGCTCTTAAACACAAGGAGAGAGCTTCATCATTGTTGCACATCAAAAGGACCCTCCAACACATTTTTCTCAAAAGACCCTCTTTGAAGGACAAATATACTTCTTCCAAGCGGCATCAATCCTTGCATCCTTTGTCAGTTCAGGAGGGTCTTAACTCTCCAATGTCCTAA 1740 0.4069 MFLQSYVTQEDYFLGTLTVKETLTYAARLRLPSDMSRNEINKVVTNVLAEMGLEDSAESRLGNWHLRGISSGEKRRLSIGIEILTQPRVMFLDEPTSGLDSAASFYVISSLSNIAHDGRIVICSIHQPSGEVFNLFDDLVLLAGGEAVYFGQATMAVKFFADAGFPCPTRRNPPEHFLRCVSPEFDSIAPLIPSKSENNASSSWNSLMNMTAEEIKSELVMNYKNSILSENARKKIREMKKSLQEEPLVGKIYDTSWLNQLCTLTDRSFLNMSRDFGYYWLRIVFYIMMSVSAGVLLFNIGTSNEAIMTRGKCDGFVFGLMIFLCLGGVPFYHEELKVFKRERFGKHYGEAIFILSHFLSSLPFVLAISVSSGTIIYHMVNFHKGFSHYFYFCMNIFSFISATEGCTLFVAALAPDLLVAIGTATGVIVFMMVPSNVFRSLADLPKFFWRYPMSYLSYITWSIQGQFKNDLIGLEFEPQMGGDAKIKGEYILDAMFGIRTDYSKWWDLGVVVCFLISYRVLYYLALKHKERASSLLHIKRTLQHIFLKRPSLKDKYTSSKRHQSLHPLSVQEGLNSPMS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1358 579 Pfam ABC-2 type transporter 260 465 IPR013525 GO:0016020|GO:0140359
Pvu1g1358 579 Gene3D - 3 162 IPR027417 -
Pvu1g1358 579 Pfam ABC-2 type transporter 126 228 IPR043926 GO:0140359
Pvu1g1358 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 154 IPR027417 -
Pvu1g1358 579 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 545 - -
Pvu1g1358 579 Pfam ABC transporter 5 97 IPR003439 GO:0005524
Pvu1g1358 579 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 5 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1358 Pvu-Chr1 37058999 37061900 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1358 - K05681 aip:107646291 812.757