Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g1350 | ATGGAGTCTGTACTGGGTAATTGGCCGTCCTATGACCCTCACAACTTCAGTCAGCTTCGACCTTCCGATCCTTCAAGTTCTTCTAAAATGGCACCGGCCACTTACCATCCTACTCACAGCAGGACCCTTCCACCATCTGATCAAGTGATAAGTACTGAAGCCAAAAATATCCTCCTGAGACATATCTATCAGCATGCTGAGGAGAAGTTGAAACCAAAAAGAGCAGCACCTGATAACCTTTTACCAGAGCATGGATGCAAGCAACCTAGAGTTTCCAGCTGA | 282 | 0.4645 | MESVLGNWPSYDPHNFSQLRPSDPSSSSKMAPATYHPTHSRTLPPSDQVISTEAKNILLRHIYQHAEEKLKPKRAAPDNLLPEHGCKQPRVSS* | 94 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g1350 | 93 | MobiDBLite | consensus disorder prediction | 69 | 93 | - | - | |
| Pvu1g1350 | 93 | MobiDBLite | consensus disorder prediction | 10 | 49 | - | - | |
| Pvu1g1350 | 93 | Pfam | Det1 complexing ubiquitin ligase | 4 | 68 | IPR018276 | - | |
| Pvu1g1350 | 93 | PANTHER | DET1- AND DDB1-ASSOCIATED PROTEIN 1 | 1 | 92 | IPR033575 | GO:0032434 | |
| Pvu1g1350 | 93 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
| Pvu1g1350 | 93 | PANTHER | DET1- AND DDB1-ASSOCIATED PROTEIN 1 | 1 | 92 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu1g1350 | K11792 | - | gmx:100784555 | 161.77 |