Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1343 ATGGAGTGGGATCTGTGGAGTTCGACGTATGACCAAGATGCGAGTGGTAGTAATTACTGGTCACCGCAACATGAATGTGACTTCTACTTTGGGTGTGGCCCTGATGTAATAGAGGAGGACGCCTTGAACATGGAATCCTGTATTCGGGTTTTGAGAATTTTGATCACCAAGGCGGATACTGAGATTGACGAACTTGAAAGAGATCTCTTGTTGCTTCAAAAGGAGTTGGCCTGTGTTGAGCATGAAAAATGGCCTGATATATGCTGTGGAATTCTCAATGAGAGAATCAATCAGCTTGATATGGCGATTAGCACTTTAAAGAATGATTGTGCTGATGAGGCTGAAGTGAAGTTACTGCTAGACAGTGAACCTGCTGGGACACTGCATGAAATACTAGCCCAGTATCTAGATATGAATATCTTGAGTCCAGTTGTGAATGTTACTGAACATGCATTAGACAAAGATTCTAGCACCATTGATTCTAATAAGATCATTAAGGAGGAAGGAAAAGATCTCCATGGAACCTCAGAAATCTCTGGAAGCTTGGAACTTCTTTTGGAGCTTCAAAAGAAATCAGATAATCCTGAAAAGATTGAGGAATTGTCTGAAGAAACACTTGTGAGAAGTCCTGATTTGGGGGGCATTATTCTTGCATCCTACCACTCTGAAAGAATGAAATTATCAGAAACATTTGATGATCAAGTTGCTGGAAATGAAGTCAGAAAAAGCCAACTCATTAATACAAATACAGGTCTAATGGATTTGTTTTGCGCCAAAAGTGAAGCCAAGAAAGAAAATGAATTTGTCAAAGAAAAAGATGTTAGCCCAGATGATTTTAGACCTGCAATTGACATCAGTAGGAAGAAAACGGGTCCACATTCCATTTTAGATACTTCACAACAACAAAAACGAGGAAAATTCAATTTAGACAAAGATCTATGTGATTTTGCTCCAACAGCTGCACAAAGAGACGACAGCAAAGAACCCAAGGTTGCTCCAGATGAAGATTTGAAGCCTCTGAATTTCCCTTTGCAAGTTGTTTATCCTAAAACATTATGTATCACTGATACAGAATTATGCTCCTTTAAAGATAGCAATGGGATGCATACCAAGAGTGCACTGTATGCTGGGTTACAGCTGATGGATGAAGGTGAAGGGGAAGAACATGAACAAGACCTTAAATCCCAACTTACTACTAACCTCAGAAAGTCCAACATGCTTTTACCTTCAAAGCTAAAAGCTTCGGAAAAGCAGAAACTGGAACTAGGGGCATTATCTTCCAGAGAACCATTTGACAGTTGTACGGAAGTTATTCCAAGTACATCTATAATTGTATCAACCAAGAGGCAGCGAAGATCCAAATCCTGTACTGATGTTACCATTTTAAATGAGCCAATGAACCGGAAGATTACTACTAGAGGGACAGTGCAACCAGACAAGCATGAGACTGAAGGTCGTGCTATTGTTCTTTATGATAGTAAATTTTCTGAATTACAAAAGAAACGAAGAGTTACAAAGTTGCCTATCACCGTGGACATACAAAATTCAAGTGTTAATTTAGACGTACCAAATTCAGAGGGGGTTTCTTTGGACAACAAAAACCAGTTAGCTCCTCATACTAACAAGTCACATTCCTTGGTGGATTCCCATGATGAGACCTCATCTTTGAATAGCTTGACATTGACTGATTTGAGGGCCATGGCAAAGGAACACAATGTAAGAAAGTACTATAAGCTTCGAAAAGTAGATTTGGTTGAACAATTAGCTCAGCGACTCAGTAGTTGCGGAACTTAA 1794 0.3946 MEWDLWSSTYDQDASGSNYWSPQHECDFYFGCGPDVIEEDALNMESCIRVLRILITKADTEIDELERDLLLLQKELACVEHEKWPDICCGILNERINQLDMAISTLKNDCADEAEVKLLLDSEPAGTLHEILAQYLDMNILSPVVNVTEHALDKDSSTIDSNKIIKEEGKDLHGTSEISGSLELLLELQKKSDNPEKIEELSEETLVRSPDLGGIILASYHSERMKLSETFDDQVAGNEVRKSQLINTNTGLMDLFCAKSEAKKENEFVKEKDVSPDDFRPAIDISRKKTGPHSILDTSQQQKRGKFNLDKDLCDFAPTAAQRDDSKEPKVAPDEDLKPLNFPLQVVYPKTLCITDTELCSFKDSNGMHTKSALYAGLQLMDEGEGEEHEQDLKSQLTTNLRKSNMLLPSKLKASEKQKLELGALSSREPFDSCTEVIPSTSIIVSTKRQRRSKSCTDVTILNEPMNRKITTRGTVQPDKHETEGRAIVLYDSKFSELQKKRRVTKLPITVDIQNSSVNLDVPNSEGVSLDNKNQLAPHTNKSHSLVDSHDETSSLNSLTLTDLRAMAKEHNVRKYYKLRKVDLVEQLAQRLSSCGT* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1343 597 MobiDBLite consensus disorder prediction 524 543 - -
Pvu1g1343 597 MobiDBLite consensus disorder prediction 524 553 - -
Pvu1g1343 597 MobiDBLite consensus disorder prediction 279 302 - -
Pvu1g1343 597 Pfam Rho termination factor, N-terminal domain 556 591 IPR011112 GO:0006353
Pvu1g1343 597 Coils Coil 48 82 - -
Pvu1g1343 597 SMART Rho_N_2_a 555 597 IPR011112 GO:0006353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1343 - - var:108332045 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1343 1 36720119 36726334 Pvu1g1343 1 36720119 36726334 ECH