Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1340 ATGAATCTCCACACCAATCTCAACTTTTTTTCTGTTCTCCTGTTCCTGTTCATTGTCTCTTCTTCCTTTCTTGCATTAGCTAAAGTTGATGAGGAATATACCTACAAAGAAGAGAGTAGCAAAGGGCCAAAGAATTGGTGGCGTATCAACCCAAAATGGAAAGTGTGTGGGAATGGAAAACTACAATCTCCCATTGATATCCTTGACAAAAGGGTGCAGGAATTTCCTCAATTGGGTAAACTTCAAAAAGATTACCAACCAGCTCCTGCTGTCCTAAAGAATACTGGTCATGCCATCATGATGCAATGGAATGGGAATGCAGGGCAGCTTAACATAAATGGAACTTACTACAAACTGATTCAATGTCATTGGCACACACCTTCAGAGCACACGTTGAATGGAAGGAAGTTTGACTTGGAACTGCATGCAGTCCATCAAAACTCTAAAGGAGAGACTGCTGTTATTGGAATATGGTATAAAATTGGTCGTCCAGATCGCTTGCTTTCAAAGCTTCTGAAGGACTTAAAATCACTTGGGGACAAGGACCTAGATTTAGGAGTGATTAACCCAGGAATCATCAAATTTGGAAGCAGAAAGTACTACAGATATGTTGGTTCTCTTACAACTCCACCATGCACTGAAGGTGTTGTTTGGACAATAGTCAAGAAGGTGAGGACAGTCTCAAGGGAGCAGTTGAGAGCATTGAAAGCAGCTCTTCATCATGAATATGAGGACAATGCAAGACCTACACAGGAAGTTAATGGAAGAGAAGTTTGGTTATACAGAGCTAAGGAAAATGCAAAGACTACTTAG 813 0.4084 MNLHTNLNFFSVLLFLFIVSSSFLALAKVDEEYTYKEESSKGPKNWWRINPKWKVCGNGKLQSPIDILDKRVQEFPQLGKLQKDYQPAPAVLKNTGHAIMMQWNGNAGQLNINGTYYKLIQCHWHTPSEHTLNGRKFDLELHAVHQNSKGETAVIGIWYKIGRPDRLLSKLLKDLKSLGDKDLDLGVINPGIIKFGSRKYYRYVGSLTTPPCTEGVVWTIVKKVRTVSREQLRALKAALHHEYEDNARPTQEVNGREVWLYRAKENAKTT* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1340 270 SMART Carb_anhydrase_2a 35 262 IPR001148 -
Pvu1g1340 270 Gene3D Alpha carbonic anhydrase 29 269 IPR036398 -
Pvu1g1340 270 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 5 264 - -
Pvu1g1340 270 SUPERFAMILY Carbonic anhydrase 32 259 IPR036398 -
Pvu1g1340 270 Pfam Eukaryotic-type carbonic anhydrase 42 260 IPR001148 -
Pvu1g1340 270 ProSiteProfiles Alpha-carbonic anhydrases profile. 31 262 IPR001148 -
Pvu1g1340 270 PANTHER CARBONIC ANHYDRASE 5 264 IPR023561 GO:0004089|GO:0008270
Pvu1g1340 270 ProSitePatterns Alpha-carbonic anhydrases signature. 128 144 IPR018338 GO:0004089|GO:0008270
Pvu1g1340 270 CDD alpha_CA_prokaryotic_like 42 260 IPR041891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1340 Pvu-Chr1 36681037 36684244 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1340 K01674 - gmx:100781864 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1340 1 36681037 36684244 Pvu1g1340 1 36681037 36684244 ECH