Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1337 ATGCCCTGCCTTCCAAAGCAATACTCCACCCTCTCACCTTCTTTTCTTATACAAAGCAATTTTTTCATCAAAATAGAAACCATGGTTTCAAAACATGGAGGCTTCTATGAACAAGGGAGCTTTCCATCACTCAAAATCCTCATACTTTTACTCCTTAATTCTATACTTCACAAAGCCAACTCAGGCTGCAATAATAACTCTTTTTCAAATTCCTTAGTTCCATTTCCACCTCATGAGATTCTCTCATCATTGCAAACACTGCCTCTGGATGGTCACTTTAGCCTAAGTAGCAATGAGGATGCTGCCAAGGACTTTGGCAACATACACCATTTTCCTCCCCTGGCAGTGCTGCATCCAAAAACAGTCTCTGATATATCACGCACCATAAAGCATGTTTTTGAAATGGGGTTTGCCTCCGAGCTGAAGGTTGCTGCAAGAGGCCATGGCCATTCCCTGCAAGGCCAGGCACAAGCACATGGGGGCCTAGTCATTAACATGGAGTCACTGCAGGGTCCTGAAATAAAAGTTCACATTGGAGAGTTCCCTTATGTGGATGTCTCAGGGGGAGAGTTGTGGATAAACATTCTGCATGAAACTCTAAAATATGGGTTGGCACCAAAGTCATGGACAGATTACCTTCACCTCACTGTTGGAGGCACTCTTTCAAATGCTGGTATAAGCGGGCAAGCCTTCAAACATGGACCTCAGATCAATAACATCTTTCAGCTTGAAGTGATCACAGGAAAAGGAGAGGTGGTTACCTGCTCAGGGAACCGAAATGCTGACCTTTTTCATGGTGTACTTGGAGGGCTTGGTCAATTCGGTATCATCACAAGGGCTAGAATTTCTCTTGAAACGGCACCAAAGATGGTGAAATGGATTAGAGTGCTATACTCCGAATTCTCTACATTTACAAAGGATCAAGAGCATTTAATATCACTTAAAAACACATTTGATTATATTGAAGGGTTTGTGATCATAAATAAAACTGGCATCCTTAACAATTGGAGATCGTCCTTTGACCCCAAAAGTCCACTTCAGGCTAGCCAATTCAATTCTGATGGAAGAACCTTTTACTGTCTTGAGATGGCAAAATACTTCAACCCTGACGAAGCAGAACTCATGAATCAGAGTATTAATCACCTACTGTCAAAGCTGAGTTACATCCAACCCACACTCTTCCGATCAGAAGTTTCTTACGTGGAATTCCTGGACAGAGTGCATGTTTCTGAGAAAAAGCTAAGAGCAAAAGGCTTGTGGGAAGTTCCCCATCCCTGGCTGAACCTTCTAATCCCAAGAAGTGAGATTCATGACTTTGCTGAAGGAGTATTTGGCAATATTCTTAAGGACACCAGTAATGGCCCCATACTCATATACCCCGTCAACCAAACAAGGTGGAATAGTAAGACATCTTTGGTTACCCCAGAGGAAGATGTTTTTTACCTGGTGGCTTTTCTATCCTCAGCAGTCCCAAATTGTACTGGTGCAAATAGTTTAGAACATATTGTATCCCAAAACAAAAGGATCATAGAGTTCTACACCAGTGCACAACTGAAAGTGAAGCAATACCTTCCCCATTACAGCACACAGGAAGAATGGCAAGCCCACTTTGGGTCACAATGGGAGGTATTCGTGGAAAGAAAAAAGGCCTATGACCCACTAGCACTGCTTGCCCCTGGCCACCGAATCTTTCAAAAGGCAGTGTCTGCGTCATGCTAG 1719 0.4316 MPCLPKQYSTLSPSFLIQSNFFIKIETMVSKHGGFYEQGSFPSLKILILLLLNSILHKANSGCNNNSFSNSLVPFPPHEILSSLQTLPLDGHFSLSSNEDAAKDFGNIHHFPPLAVLHPKTVSDISRTIKHVFEMGFASELKVAARGHGHSLQGQAQAHGGLVINMESLQGPEIKVHIGEFPYVDVSGGELWINILHETLKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNIFQLEVITGKGEVVTCSGNRNADLFHGVLGGLGQFGIITRARISLETAPKMVKWIRVLYSEFSTFTKDQEHLISLKNTFDYIEGFVIINKTGILNNWRSSFDPKSPLQASQFNSDGRTFYCLEMAKYFNPDEAELMNQSINHLLSKLSYIQPTLFRSEVSYVEFLDRVHVSEKKLRAKGLWEVPHPWLNLLIPRSEIHDFAEGVFGNILKDTSNGPILIYPVNQTRWNSKTSLVTPEEDVFYLVAFLSSAVPNCTGANSLEHIVSQNKRIIEFYTSAQLKVKQYLPHYSTQEEWQAHFGSQWEVFVERKKAYDPLALLAPGHRIFQKAVSASC* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1337 572 Gene3D - 99 564 IPR016167 -
Pvu1g1337 572 Gene3D - 166 289 IPR016169 -
Pvu1g1337 572 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 36 569 - -
Pvu1g1337 572 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 113 148 IPR006093 GO:0016491
Pvu1g1337 572 ProSiteProfiles PCMH-type FAD-binding domain profile. 109 287 IPR016166 GO:0071949
Pvu1g1337 572 SUPERFAMILY FAD-linked oxidases, C-terminal domain 288 564 IPR016164 GO:0003824|GO:0050660
Pvu1g1337 572 Pfam FAD binding domain 113 256 IPR006094 GO:0050660
Pvu1g1337 572 Gene3D - 290 523 IPR016170 -
Pvu1g1337 572 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 288 564 IPR015345 GO:0009690|GO:0019139|GO:0050660
Pvu1g1337 572 PANTHER GULONOLACTONE OXIDASE 36 569 - -
Pvu1g1337 572 SUPERFAMILY FAD-binding/transporter-associated domain-like 96 284 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1337 Pvu-Chr1 36632356 36635291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1337 K00279 - gmx:100777568 975.696