Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1334 ATGCTTCCATTTCACTCCTTCATTTCACTCCTATTTATGCTTCTAATCACTCATTCTGCCATAACAGAAGCACAATCTGGAGTATGTTATGGAAGACTTGGCAACGACTTGCCATCTCCCAGAGAAGTTGTGGGACTCTACAATCAATACAACATTGGCAGGATGAGAATTTATGATCCAAATCCAGAAGTTCTTGGAGCTTTGAGAGGCTCCACTATTCAGCTGCTGTTAGACATTCCAAATAAAGACCTCGGAAATCTAGCATCTAGCCAAGTGAATGCAAACAAATGGGTGCAAGACAACATAAAAAACTATGCCAATGTCAGATTCAGATACATTGCTGTGGGAAATGAAGTAAAGCCTGAAGATTCAGCTGCACCGTTTGTAGTGCCTGCAATGCAAAACATTCAAAATGCCATTTCTGCAGCAGGCCTTGGAAACCAAATAAAAGTTTCCACTGCCATTGAGACTGGTGCCTTGGCCGAATCATTCCCTCCATCAAAAGGCTCCTTCAAGTCTAACTATAGAGCAGCATATATTGATGGTGTCATAAGATTTCTGGTGAACAATAACTCCCCATTATTGGTTAATGTTTACACTTATTTCGCTTACGCCAAATCTGGGGACATTAGTCTTGATTATGCTCTTTTCACTTCTCCTTCGGTGGTGGTGAATGATGGTTCACATGGTTATAGAAACCTTTTTTATGCTATGGTGGATGCTGTTTATTCTGCATTGGAAAAAGTAGGGGGAGGGTCACTGAACATAGTTGTGTCTGAGACTGGATGGCCTTCTTCTGGTGGGAAGGGAACTACACTTGACAATGCAAGAACTCACAACACAAAGTTGGTTCAACATGTCAAAAGTGGAACTCCAAAAAGACCTGGTAAACCTATTGAAACATATTTGTTTGCCATGTTTGATGAAAATCAGAAGCATCCAGAGCATGAGAAATTTTGGGGGCTCTTCCGTCCAGATAAAACGCCCAAATACTCTATTAATTTGAATTAG 1011 0.4085 MLPFHSFISLLFMLLITHSAITEAQSGVCYGRLGNDLPSPREVVGLYNQYNIGRMRIYDPNPEVLGALRGSTIQLLLDIPNKDLGNLASSQVNANKWVQDNIKNYANVRFRYIAVGNEVKPEDSAAPFVVPAMQNIQNAISAAGLGNQIKVSTAIETGALAESFPPSKGSFKSNYRAAYIDGVIRFLVNNNSPLLVNVYTYFAYAKSGDISLDYALFTSPSVVVNDGSHGYRNLFYAMVDAVYSALEKVGGGSLNIVVSETGWPSSGGKGTTLDNARTHNTKLVQHVKSGTPKRPGKPIETYLFAMFDENQKHPEHEKFWGLFRPDKTPKYSINLN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1334 336 Pfam Glycosyl hydrolases family 17 27 334 IPR000490 GO:0004553|GO:0005975
Pvu1g1334 336 ProSitePatterns Glycosyl hydrolases family 17 signature. 254 267 IPR000490 GO:0004553|GO:0005975
Pvu1g1334 336 Gene3D Glycosidases 26 336 - -
Pvu1g1334 336 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 16 333 - -
Pvu1g1334 336 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 333 IPR044965 GO:0004553|GO:0005975
Pvu1g1334 336 SUPERFAMILY (Trans)glycosidases 27 334 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1334 Pvu-Chr1 36431446 36433219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1334 22 335 Glycoside Hydrolase AT3G57270 61.006 5.44e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1334 - - gmx:547822 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1334 1 36431446 36433219 Pvu1g1334 1 36431446 36433219 ECH