Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1324 ATGGGATCCCAAACACAGTCTCAACTTCATGTGGTGGACTTCACTGATGAAGCCATGAAGCCTGGCACCGATGCATGGCTCTCAGCCTGCACTCTTGTCAGGACTGCACTTGAAGACAATGGTTGTTTTCTTGCACGCTATCATAGAATTGGCAAAGATCTTTGTGATTCTGTTGTATCTTCAATGGAAGACTTGTTTAGTCTCCCAGTGGAAACAAAAGCACAAAATACTAGGTGCCAAAAATTCGCCCACATAATGGGGTTGCAGGGGAATCATCGTTTCTGTGAAAGCATCAATAAGTATGCTAAGTTGTTGGGAGAATTAGACCATATGACAAAGAGAATGGTGTTTGAGAGCTATGGCGTGGAAATGCAAGGATGCGAGTGTATGATAGAATCAAGCGATTATCTGCTTCGATGCATGAAATATAGGACACCTGAGACGGATGAAAAGGATTTGGGAATGCCTTCTCACACAGACTTGACTATCGTATCCATAGTTCATCAGCTGAATAATCTGAATGGCTTGGAAATCAAACTTAAGGATGGAGAATGGATTGGGGTTGATGCCTCTTCCTCCTTGTTTCTGGTTGTAGTCGGTGACGCATTCCATGTGTGGAGTAATGGTAGAATACGACCATATGAACATAGAGTTACCATGAATGCAACGAAAACCAGATACTCTATGGGACTATTTTCTTTTAGTGGTAAGATTTTGCAGATACCGGCTGAGCTAGTGAATGAGCAACATCCCTTGCGTTATAAATCAATATTGGACAATTATGAATACATTCGTTTCTATGAGAAAGAGAAAAGCAAAGACCCTTATTCTCGAATCGAAGCCTACTGTGGAATCTCATCCCTATACTGA 870 0.4172 MGSQTQSQLHVVDFTDEAMKPGTDAWLSACTLVRTALEDNGCFLARYHRIGKDLCDSVVSSMEDLFSLPVETKAQNTRCQKFAHIMGLQGNHRFCESINKYAKLLGELDHMTKRMVFESYGVEMQGCECMIESSDYLLRCMKYRTPETDEKDLGMPSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASSSLFLVVVGDAFHVWSNGRIRPYEHRVTMNATKTRYSMGLFSFSGKILQIPAELVNEQHPLRYKSILDNYEYIRFYEKEKSKDPYSRIEAYCGISSLY* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1324 289 Pfam 2OG-Fe(II) oxygenase superfamily 145 234 IPR044861 -
Pvu1g1324 289 Gene3D - 1 90 IPR027443 -
Pvu1g1324 289 Gene3D - 91 265 IPR027443 -
Pvu1g1324 289 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 88 IPR026992 -
Pvu1g1324 289 SUPERFAMILY Clavaminate synthase-like 7 270 - -
Pvu1g1324 289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 133 235 IPR005123 -
Pvu1g1324 289 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 78 284 - -
Pvu1g1324 289 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 77 - -
Pvu1g1324 289 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 78 284 - -
Pvu1g1324 289 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1324 Pvu-Chr1 35994705 35996399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1324 96 255 Glycosyltransferase AT5G59530 25.904 1.80e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1324 - - pvu:PHAVU_001G127500g 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1324 1 35994705 35996399 Pvu7g2561 7 48804687 48807018 PCT