Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1323 ATGAAAAAAATGGGATCTGAGACTGAAGTGAAGCTTCCAATTATTGACTTCTCCGTCGTGGAGTTGGAATCCAATGTTGCAGAGTGGGAATCAGTGAAATCCCAAGTTCACAAAGCACTTGTAGAGTATGGTTGCTTTGAGGCTGTGTTTGATGAAGTACCTTTGCATATTCGAAAAGCAATATTTTTTGAAGTGGACGAGTTATTCAATCTCCCTTTAGAAACCAAGAAACTAGCTGTGTCAAGCAAGCCATTCCGTGGTTATGTTGGTCCTATTCAACTCTATGAGAGCATAGGAATTGACGATGCTGATGTTTATGAGAAAGTGGAAAGTTTGATCAACATCTTATGGCCACAAGGAAAATCAAGTTTTAGCAAAAATCTGCAGTTCTTCACTGAGAAAGTGTCAAGGTTGGATCGGATGATTAGGAAGATGTGTTTGGAGAGTTTAGGTGTTGAAAAGTATTTGGATGAGCACATGAACTCAACATATTACCTTGCACGGCTTATCAAGTACACAGCCCCTCAAACTAATGAACCGAAAGTTGCCATAGCAGAGCACACAGATAAGAACATATTCACCATACTATGTCAAAATCAAATTGATGGCTTAGAGATTCAGACCAAAAATGGAGAGTGGATCAAATACAAGCCCTCATCATCAAACAGTTTCGTTGTTGTCACTGGCGACACATTTTATGCGTGGACTAATGGGAGGGTGCATACACCGATTCACCAAGTGATGATGACTGGAAATGAGACAAGGTTGACTGTTGGATTGTTCACAGTTCCAAAACCAGGGTTCATAATAAAGGCACCAAATGAGCTTGTGACAGAGGAGCACCCTTTGCTTTTCAAGCCCTTTGTCCAGAGTGAGTTCATGAAGTTTCTTCGCTCTTCTCAGAATACAAAAAATGCTCTCAAGGTTTATTGTGGAGTTTGA 942 0.4045 MKKMGSETEVKLPIIDFSVVELESNVAEWESVKSQVHKALVEYGCFEAVFDEVPLHIRKAIFFEVDELFNLPLETKKLAVSSKPFRGYVGPIQLYESIGIDDADVYEKVESLINILWPQGKSSFSKNLQFFTEKVSRLDRMIRKMCLESLGVEKYLDEHMNSTYYLARLIKYTAPQTNEPKVAIAEHTDKNIFTILCQNQIDGLEIQTKNGEWIKYKPSSSNSFVVVTGDTFYAWTNGRVHTPIHQVMMTGNETRLTVGLFTVPKPGFIIKAPNELVTEEHPLLFKPFVQSEFMKFLRSSQNTKNALKVYCGV* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1323 313 SUPERFAMILY Clavaminate synthase-like 9 298 - -
Pvu1g1323 313 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 90 IPR026992 -
Pvu1g1323 313 Gene3D - 1 303 IPR027443 -
Pvu1g1323 313 Pfam 2OG-Fe(II) oxygenase superfamily 170 261 IPR044861 -
Pvu1g1323 313 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 312 - -
Pvu1g1323 313 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 7 312 - -
Pvu1g1323 313 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 264 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1323 Pvu-Chr1 35972443 35973812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1323 3 293 Glycosyltransferase AT5G59530 22.150 1.51e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1323 - - gmx:100817152 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2559 7 48787788 48790487 Pvu1g1323 1 35972443 35973812 PCT