Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1320 ATGGCTCAATTGCTATCATCGTCTTACTCCTTGACTATTTGCTCTAGAAATAAACCTTACTTAAAACCTTTTATGCAATGCTCAACACCTTTTTCTATTGCGGTTTCTTGTAAGAATTCTAAACCTTCATCTAGAGGGTTTTTCTTGCAAGAACAGAAGCTAAGAAAAGGTTCTCTAGTAGTACATGCTGCTGCAGTTTCAACTAGCCCGGAAACCCCAGTTCAAACTAGCTCTGGTGACCCTTTTAGACCACAGAGAGTCATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCAACTGCCCTCCACCTTTCTAACAAGGGTTATGAGGTTGCTATTGTTGACAGCCTTGTGCGACGCCTTTTTGATCACCAGCTTGGACTGGAGTCTCTAACACCAATATCCTCCATCCAGAATCGTCTTCAGTGTTGGAGATCTCTCACTGGGAAAAATATTGAGCTCTACGTTGGAGACATATGTGATTTTGAGTTCTTATCTGAAACCTTCAAGACATATGAACCTGATGCTGTCGTCCACTTTGGGGAACAGCGGTCTGCTCCTTACTCTATGATTGATCGGTCAAGAGCTGTGTATACCCAGCAAAACAATGTTATTGGGACACTGAATGTGCTCTTTGCCATAAAAGAGTTCAGAGAGCAGTGTCATCTAGTTAAGCTTGGGACCATGGGTGAGTATGGGACTCCAAATATTGATATTGAGGAGGGTTATATTACCATTACTCACAATGGAAGGACAGACACTTTACCTTATCCCAAGCAAGCTAGCTCTTTCTATCATCTAAGCAAGGTACATGATTCACATAACATAGCTTTCACTTGCAAGGCTTGGGGCATTCGAGCAACTGATTTGAATCAAGGAGTGGTATATGGGGTAAGGACAGATGAGACTGCACTGCATGAAGATCTGTATAACAGGTTTGATTACGATGGAATATTTGGAACTGCATTGAATCGGTTCTGTGTTCAGGCTGCTGTTGGTCATCCACTGACTGTGTATGGTAAAGGAGGCCAGACTAGGGGCTTCCTTGACATAAGAGATACAGTTCAATGTGTTGAGCTTGCCATCGCAAACCCTGCAAAGCCCGGGGAGTTCCGAGTCTTCAACCAATTCACTGAGCAGTTTTCAGTCAATCAGCTTGCCAACCTTGTTACCAAAGCTGGTGAGAAGCTAGGCCTTGATGTGAAAACTATCAATGTGCCTAACCCAAGAGTTGAGGCAGAAGAGCATTACTACAACTGCAAAAACACTAAACTAGTCGATCTAGGATTGAGACCACACTTTCTTTCAGATTCGCTCCTTGATTCACTGCTCAACTTTGCTGTTCAGTACAAGGACCGTGTTGACACAAAACAAATTATGCCCAGTGTGTCTTGGAAAAAAATTGGGGTCAAAACAAAAACTGTTACAGCCTAA 1434 0.431 MAQLLSSSYSLTICSRNKPYLKPFMQCSTPFSIAVSCKNSKPSSRGFFLQEQKLRKGSLVVHAAAVSTSPETPVQTSSGDPFRPQRVMVIGGDGYCGWATALHLSNKGYEVAIVDSLVRRLFDHQLGLESLTPISSIQNRLQCWRSLTGKNIELYVGDICDFEFLSETFKTYEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEFREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETALHEDLYNRFDYDGIFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFSVNQLANLVTKAGEKLGLDVKTINVPNPRVEAEEHYYNCKNTKLVDLGLRPHFLSDSLLDSLLNFAVQYKDRVDTKQIMPSVSWKKIGVKTKTVTA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1320 477 PANTHER BNAA03G52320D PROTEIN 58 475 - -
Pvu1g1320 477 Gene3D - 293 454 - -
Pvu1g1320 477 Gene3D - 86 377 - -
Pvu1g1320 477 CDD SQD1_like_SDR_e 86 466 - -
Pvu1g1320 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 456 IPR036291 -
Pvu1g1320 477 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 58 475 - -
Pvu1g1320 477 Pfam NAD dependent epimerase/dehydratase family 87 374 IPR001509 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1320 1 476 Acyl Lipid Metabolism Gene Families AT4G33030 77.917 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1320 K06118 - gmx:100805019 900.968