Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1312 ATGGCTCTAATCGCTGCCAGGATTCTCGGTTCCAATTCGCGAACCGCGCTCCGCCGCTGGTGTCGCTTCTCCTACTCTTCCGCCTCCGCAGCGGTGGCGGAAGTGGAGAGCACGGAGGTGAAGGACTACGCCGATTACCGGCGCTCCCTATACGGACAGATCACGCACAAGGCGCTCCTCGTCGACGCCGTTGGCACGCTCGTCCTCCCCTCGCAACCTATGGCTCAGATATATAGGACGATCGGTGAAAAGTATGGTGTGGAGTACTCGGAGAATGAAATACTGTCAAGATACAGAAGAGCGTATGGGCAGCCTTGGGGTAAATCTCGTCTCAGATATGTTAATGATGGTAAACCCTTCTGGCAATACATAGTTAGTTATTCCACCGGCTGTTCAGATCCTCAATACTTTGAAGAACTTTATAACTATTATATGACAGACAAGGCATGGCACCTCAATGATCCTGAAGCAGAAGAAGTATTTAGAGCTCTTAGGAAATCAGGTGTGAAATTAGCTGTTGTATCAAATTTTGACACTAGGTTAAGACCTCTTCTGCGGGCATTAAATTGTGACACTTGGTTTGATGCGGTAGCAGTGTCAGCTGAGGTTGCGGCCGAGAAACCAAATCCAACTATATTTCTTAAAGCATGTGAACTATTGGATGTAAAACCCGAGGATGCTGTTCATGTTGGGGATGATCGCAGAAATGATATATGGGGTGCCAGGGATGCTGGCTGTGATGGTTGGCTTTGGGGAAGCGATGTTCACACTTTTAAGGAGGTAGCACAGAGGATTGGGGTTCAGGTCTGA 810 0.4864 MALIAARILGSNSRTALRRWCRFSYSSASAAVAEVESTEVKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRTIGEKYGVEYSENEILSRYRRAYGQPWGKSRLRYVNDGKPFWQYIVSYSTGCSDPQYFEELYNYYMTDKAWHLNDPEAEEVFRALRKSGVKLAVVSNFDTRLRPLLRALNCDTWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDGWLWGSDVHTFKEVAQRIGVQV* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1312 269 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 24 269 - -
Pvu1g1312 269 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 163 245 IPR006439 -
Pvu1g1312 269 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 57 251 - -
Pvu1g1312 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 56 67 IPR006439 -
Pvu1g1312 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 164 177 IPR006439 -
Pvu1g1312 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 194 210 IPR006439 -
Pvu1g1312 269 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 212 232 IPR006439 -
Pvu1g1312 269 Gene3D - 72 145 IPR044924 -
Pvu1g1312 269 Pfam Haloacid dehalogenase-like hydrolase 65 247 IPR041492 -
Pvu1g1312 269 Gene3D - 60 251 IPR023214 -
Pvu1g1312 269 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 146 246 IPR006439 -
Pvu1g1312 269 PANTHER - 24 269 - -
Pvu1g1312 269 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 57 250 IPR011949 -
Pvu1g1312 269 SFLD Haloacid Dehalogenase 57 251 - -
Pvu1g1312 269 SUPERFAMILY HAD-like 57 260 IPR036412 -
Pvu1g1312 269 CDD HAD_dREG-2_like 157 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1312 Pvu-Chr1 35502847 35507028 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1312 - - gmx:100789672 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1312 1 35502847 35507028 Pvu1g1312 1 35502847 35507028 ECH