Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1309 ATGATGAAACTTCCCCTGCACTTCGCGGTGGCCATGGCGGTGATTGTGGTAACCGTTTGGGTGGTGAACGTGCGCAACAGTGTTCGAAAGTCGGAGAAAGATGTGGAAGGCATGAAGGATTGGCAGTACGAAGTTCTTCCAATTGATGGTGGTATTGGACCGGAGAGTTTCGCCTTCAATCATCATGGTGAAGGACCTTACACAGGCATTTCTGATGGACGAATCATCAAATGGCAGCGTTCTGAGAATCGTTGGCTCAATTTTTCCTTCACTTCCCCACACAGGAATGAAGAGTGTGGAGGAGCATATGAGGAGCATGGGAAGAAAGAGGAGGTGTGTGGGCGTCCTCTTGGGTTGTGCTTTAGCATGGTATCCAATGAACTTTACATTGCAGATGCTTACAATGGCTTAGTTGTTGTTGGCCCCAATGGTGGCACTCCCTTAAGACTCATATCAACTCTAGTAGATGATGATGAAGAAGAAGAAGAAGGAGAAGGTGAACCCTTGACATTTACTAATGGTTTGGATGTTGATCAACGAACTGGAGCAGTATACTTCACCACCAGTAGTTCTAAATATCAAAGGAGGAATTACATCTCTTTGATCCTGAGTAAAGATAAATCGGGGAAGCTAATGAAATATGAGCCAGAAAGTGAAGAAGTTAGCATTGTTGTAAACAATCTCTCATATGCAAATGGTGTAGCATTAAGCAAAGATGGTGACTATATTCTAATAGTAGAGACAACAACATGTAGAGTACTAAGGTATTGGCTACAAACACCAAAAGCTGGAACATTGGAAGTGTTTGCAGAAGTACCAGGTTTCCCAGACAACATCAAACGAAGTCCAAGAGGGGGGTTTTGGGTGGGAATTTACTCAAGAAGACAAAAAATTGTCCACTGGATTCTATCATATCCATGGATTGGAAAAGTTTTGCTTAGATTTCCTTTGGACATCACAAAAGCTTATTTATATTTGGCTAAGCTAAAAAGGAGTAGTGGATTGGCAATTAGGCTAAGTGAGAATGGAGATATATTAGAAATTGTTGAAGACAAAGAATGGAACAAAGGGAGTTCTATTAGTGAAGTGGAGGAAAGAGATGGAATATTATGGGTGGGATCCATAGATGCACCTTTTGTTGGTAAGTATACTAAGAACAAGTAA 1164 0.4149 MMKLPLHFAVAMAVIVVTVWVVNVRNSVRKSEKDVEGMKDWQYEVLPIDGGIGPESFAFNHHGEGPYTGISDGRIIKWQRSENRWLNFSFTSPHRNEECGGAYEEHGKKEEVCGRPLGLCFSMVSNELYIADAYNGLVVVGPNGGTPLRLISTLVDDDEEEEEGEGEPLTFTNGLDVDQRTGAVYFTTSSSKYQRRNYISLILSKDKSGKLMKYEPESEEVSIVVNNLSYANGVALSKDGDYILIVETTTCRVLRYWLQTPKAGTLEVFAEVPGFPDNIKRSPRGGFWVGIYSRRQKIVHWILSYPWIGKVLLRFPLDITKAYLYLAKLKRSSGLAIRLSENGDILEIVEDKEWNKGSSISEVEERDGILWVGSIDAPFVGKYTKNK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1309 387 SUPERFAMILY Calcium-dependent phosphotriesterase 40 383 - -
Pvu1g1309 387 Pfam Strictosidine synthase-like, N-terminal 44 78 - -
Pvu1g1309 387 PANTHER STRICTOSIDINE SYNTHASE-RELATED 6 381 - -
Pvu1g1309 387 Gene3D - 42 387 IPR011042 -
Pvu1g1309 387 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 6 381 - -
Pvu1g1309 387 Pfam Strictosidine synthase 173 260 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1309 Pvu-Chr1 35454082 35460415 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1309 - - gmx:100789150 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1309 1 35454082 35460415 Pvu1g1309 1 35454082 35460415 ECH