Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1308 ATGAACCCAGGGCTTGTTGCAGTTGCAACCTTGCTTGCACTCTTCGCCATCACCTTCTCCTTCTTCAACCCTCAAGCCCTGTTTTCTCCGCCCCATGTTCCGGGATCCAAGGATCACCTCCACGCAGCGCAGATAATCCACCTTGCCGGCGCCGTCGGGCCTGAGAGTCTGGTTTTTGACGCTCACGGTGGAGGGCCCTACACCGGCGTCGCCGACGGCCGGATTTTGAAGTGGGAAGGCGAGAAGCAAGGGTGGACTGAGTTTGCTTTCACCAGTTCCAATAGGTCGGATTGTGTACGTCCATTTGCACCAGAGTTGGAGCATGTTTGTGGGAGGCCTTTAGGACTAAAATTTGATAAGAAAAGTGGAGATCTGTACATTGCTGATGCCTATCTAGGCCTTAAGGTAGTGGGATCTGCAGGGGGTTTGGCCACCGGAGTGGTGACAGAAGTTGAAGGCCAGCCCTTGCGCTTCACTAATGACATGGACATCAGTGAAGAGGAAGATGTGATTTACTTCACTGAATCAAGCACAATCTCCCAGAGAAGGCAATTTATGGTTGTACTCCTTAGTGGAGATAGGACTGGTAGGTTAATGAAATATGACAAGTCAACAAAAGAAGTGAAGGTCTTATTACGTGACCTTGCTTTTCCTAATGGTGTTGCTTTGAGCAAAGATGGATCATTTGTTCTGGTAGCAGAAACCACTACTTGCAAGATCTTGCAACTTTGGCTTCGTGGACCCAAGGCTGGTCAAGTGGATATTTTTGCCGAATTACCTGGTTTTCCAGACAATATAAGAAGAAATTCAGAAGGGCATTTTTGGGTAGCTCTGCATGCAAAGGGAAGCCCTTTTGGGAAGTGGGTTTCTTCCAATCCATGGGCAGGAAAGGTAATGATAAAGATTGGATTTAACTTCAAACAGTTGCACTCATCATTTGCAGGCTGGAAGCCTCATGCTGTTGCTGTAAAGCTAAGTGAGAGAGGAGAGATACTAGAAGTCTTGGAAGATAGTGAGGGGAAGACCTTAAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGGAAGCTTTGGATTGCATCTGTGTTGATGCCTTTCATTGGCATTTATGGTTTGTGA 1116 0.4713 MNPGLVAVATLLALFAITFSFFNPQALFSPPHVPGSKDHLHAAQIIHLAGAVGPESLVFDAHGGGPYTGVADGRILKWEGEKQGWTEFAFTSSNRSDCVRPFAPELEHVCGRPLGLKFDKKSGDLYIADAYLGLKVVGSAGGLATGVVTEVEGQPLRFTNDMDISEEEDVIYFTESSTISQRRQFMVVLLSGDRTGRLMKYDKSTKEVKVLLRDLAFPNGVALSKDGSFVLVAETTTCKILQLWLRGPKAGQVDIFAELPGFPDNIRRNSEGHFWVALHAKGSPFGKWVSSNPWAGKVMIKIGFNFKQLHSSFAGWKPHAVAVKLSERGEILEVLEDSEGKTLKFISEVEEKDGKLWIASVLMPFIGIYGL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1308 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Pvu1g1308 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 5 369 - -
Pvu1g1308 371 Gene3D - 37 370 IPR011042 -
Pvu1g1308 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
Pvu1g1308 371 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 10 5 369 - -
Pvu1g1308 371 SUPERFAMILY Calcium-dependent phosphotriesterase 26 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1308 Pvu-Chr1 35422129 35425273 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1308 - - gmx:100815025 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1308 1 35422129 35425273 Pvu1g1308 1 35422129 35425273 ECH