Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1303 ATGCTTTCTTCTGCAATTTCTCTGAAGCCCTTCCTTCAGTCCCTTTTCATTGATCGTTATGCTCAGAGCTCAACTGCTGCAACCAGGTGGGAGTGTTTGGGGTTTAACAAGTCAACAAATTTCAGTACCAAGAGAGTGTTGTGGACAGATGGGTTCAAGCTGAGTTGCTTGGTTGATAACAGAGAGATGGACGTGGAGTCATCATCATCATCTTTTGTAGACGATGCTGCTGTGAGATTAAGTGGTATCGAAGAGGATTCAGGAGAGCCTAGTATTTCTACAATAGTGATGAATTTCGAGAATAAGTTTGATCCTTTTGGAGCAATTAGCCCCCCACTTTACCAAACGGCTACTTTTAAGCAGCCTTCTGCAATAGAAAACGGTCCCTATGACTATACCAGAAGTGGAAATCCTACTCGCGATGCTTTAGAAAGTTTACTGGCAAAACTTGATAAAGCAGATAGAGCCTTGTGCTTCACCAGCGGAATGGCTGCTTTGACTGCTGTTGTTCATCTTGTTGGAACTGGTGAGGAAATTGTTGCTGGAGATGATGTATATGGGGGCTCAGATAGGTTGCTGTCTCAAGTAGTTCCAAGGACTGGAGTTGTGGTGAAACGGGTAAATACCACTGATCTAAATGAGGTTGCATCTGCCATTGGACCCAGGACTAAGCTTGTGTGGCTTGAGAGTCCAACCAATCCTCGGCTACAAATTTCTGATATTCGAAAAATAGCAGAGATGGCTCATTCACATGGTGCTCTTGTGTTAGTGGACAATAGTATCATGTCACCTGTATTGTCCCGGCCATTAGAACTTGGAGCAGATATTGTCATGCACTCAGCTACAAAATTTATTGGTGGACATAGTGACATTATGGCTGGTGTGCTTGCTGTGAAGGGTGAAAAGTTGGGAAAGGAATTGTATTTCTTGCAAAATGCAGAGGGTTCAGGCTTAGCCCCATTTGACTGTTGGCTTTGTATGCGAGGAATCAAGACCATGGCCCTGAGAGTCGAAAAGCAACAGGATAATGCACAAAAGATTGCTGAGTTCCTTGCTTCCCATCCTCGAGTTAAGAAAGTGAATTATGCTGGCTTGCTTGATCATCCCGGTCGTGATTTACACTATTCTCAGGCAAAGGGTGCAGGATCTGTGCTTAGCTTCTTGACTGGTTCACTGGCACTTTCAAGACATATTGTTGAAACTACCAATTACTTCAGCATAACCGTCAGCTTTGGGAGTGTTAAGTCCCTTATCAGCATGCCATGCTTTATGTCACATGCAAGCATACCTTCTGCAGTTCGTGAGGCCAGGGGTTTAACTGAAGATCTTGTTCGTATATCTGTGGGGATTGAGGATGTGAATGATCTCATTTCTGATCTAGACAATGCACTTAGAACAGGGCCTTTTTAA 1410 0.4383 MLSSAISLKPFLQSLFIDRYAQSSTAATRWECLGFNKSTNFSTKRVLWTDGFKLSCLVDNREMDVESSSSSFVDDAAVRLSGIEEDSGEPSISTIVMNFENKFDPFGAISPPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALTAVVHLVGTGEEIVAGDDVYGGSDRLLSQVVPRTGVVVKRVNTTDLNEVASAIGPRTKLVWLESPTNPRLQISDIRKIAEMAHSHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIGGHSDIMAGVLAVKGEKLGKELYFLQNAEGSGLAPFDCWLCMRGIKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLLDHPGRDLHYSQAKGAGSVLSFLTGSLALSRHIVETTNYFSITVSFGSVKSLISMPCFMSHASIPSAVREARGLTEDLVRISVGIEDVNDLISDLDNALRTGPF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1303 469 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 275 289 IPR000277 GO:0019346|GO:0030170
Pvu1g1303 469 Gene3D - 91 332 IPR015421 GO:0003824
Pvu1g1303 469 Pfam Cys/Met metabolism PLP-dependent enzyme 94 464 IPR000277 GO:0019346|GO:0030170
Pvu1g1303 469 Gene3D Aspartate Aminotransferase, domain 1 333 466 IPR015422 GO:0003824
Pvu1g1303 469 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 32 468 IPR000277 GO:0019346|GO:0030170
Pvu1g1303 469 SUPERFAMILY PLP-dependent transferases 99 465 IPR015424 -
Pvu1g1303 469 CDD CGS_like 107 465 IPR000277 GO:0019346|GO:0030170
Pvu1g1303 469 PANTHER BNAC04G24570D PROTEIN 32 468 - -
Pvu1g1303 469 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 93 466 IPR006238 GO:0004121|GO:0071266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1303 Pvu-Chr1 35247003 35254243 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1303 K01760 - gmx:100812354 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1303 1 35247003 35254243 Pvu1g1303 1 35247003 35254243 ECH