Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1300 ATGGTGTGCGCGCTTGTGGACGCCAAAATGGGAAGCTTCTTGGAGTCCATCGGAAACTTCTTCAACGGCGGCGAACAGATCCCGTGGTGCGACCGTGACGTCATTGCTGGCTGTGAGAGAGAAATTGCAGAGGCTGCTAATGGTGACTCTGAGGAGCGGAAGAATGAGAGTATTATGAGGTTGTCATGGGCTCTTGTTCATTCAAGGCAAAAGGAAGATGTTCAGCGAGGGATAGCCATGCTTGAAACTTCTTTGGGCAATGATAAAAGTCCTTTGCATCAAAGAGAGAAGTTTTATCTTCTGGCTGTTGGTTACTATAGAAGTAATGACTATGGAAGGAGCCGGCAGCTTGTGGATCAATGTTTGCAGATTGCACCTGATTGGAGGCAGGCACTAACCCTAAAGAAAATAGTTGAAGAACGAATTGCTAAAGATGGTGTAATAGGAATTGGCATCACTGCAACAGCTGTGGGACTTGTAATTGGTGGCATTGCTACCGCATTTGCCCGGAGGAATTGA 519 0.4682 MVCALVDAKMGSFLESIGNFFNGGEQIPWCDRDVIAGCEREIAEAANGDSEERKNESIMRLSWALVHSRQKEDVQRGIAMLETSLGNDKSPLHQREKFYLLAVGYYRSNDYGRSRQLVDQCLQIAPDWRQALTLKKIVEERIAKDGVIGIGITATAVGLVIGGIATAFARRN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1300 172 Pfam Fis1 N-terminal tetratricopeptide repeat 56 85 IPR028058 -
Pvu1g1300 172 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN 6 172 - -
Pvu1g1300 172 CDD Fis1 28 146 IPR033745 -
Pvu1g1300 172 PIRSF TPR_repeat_11_Fis1 9 171 IPR016543 GO:0000266
Pvu1g1300 172 SUPERFAMILY TPR-like 15 171 IPR011990 GO:0005515
Pvu1g1300 172 Gene3D Tetratricopeptide repeat domain 29 171 IPR011990 GO:0005515
Pvu1g1300 172 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 6 172 IPR016543 GO:0000266
Pvu1g1300 172 Pfam Fis1 C-terminal tetratricopeptide repeat 95 147 IPR028061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1300 Pvu-Chr1 35220129 35223507 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1300 K17969 - gmx:100785425 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1300 1 35220129 35223507 Pvu1g1300 1 35220129 35223507 ECH