Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1298 ATGGAGTACATGGAATTGGTAAAGGAGTTGGAGCAAAAGTTGATATTGAATCAAGAAAGACATGATTGCAATAGTTATGTGACTGATAATGGAGAGGAAACCATTGTAAGTGTGGCTGTGGCAACAACTATAATTGGTGTTGCATTTGGAGGGTGGATGAATGACAAGCTAGGGAGAAAGAGATCTATTTTGGTGCCCGATGTTGCATTTTTTCTTGGTGCTTTGGTTATGGCTGTTGCGCCTGTTCCATTGGTGATCATTATGGTAAGAGTTTTAGTTGGTTTGGGAGTTGGAATGGCATCCATGACTGCCCCTCTATACATCTATGAAGCTTCCCCAACCAAGATCAGAGGTGCTCTAGTCAGTATCAATGGTTCATGCTTTGAGTTTTTGTCATGA 399 0.4135 MEYMELVKELEQKLILNQERHDCNSYVTDNGEETIVSVAVATTIIGVAFGGWMNDKLGRKRSILVPDVAFFLGALVMAVAPVPLVIIMVRVLVGLGVGMASMTAPLYIYEASPTKIRGALVSINGSCFEFLS* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1298 132 ProSitePatterns Sugar transport proteins signature 2. 92 117 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu1g1298 132 PANTHER INOSITOL TRANSPORTER 4-LIKE 15 125 - -
Pvu1g1298 132 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 132 IPR020846 GO:0022857
Pvu1g1298 132 Gene3D MFS general substrate transporter like domains 2 131 IPR036259 -
Pvu1g1298 132 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 15 125 - -
Pvu1g1298 132 SUPERFAMILY MFS general substrate transporter 34 128 IPR036259 -
Pvu1g1298 132 Pfam Sugar (and other) transporter 23 127 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1298 Pvu-Chr1 35179906 35184151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1298 32 125 Organic Solute Cotransporters AT2G35740 64.894 1.27e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1298 K08150 - pvu:PHAVU_011G145500g 168.703