Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1293 ATGGGTGATTCGTCGGAGGATTTCTCGGTGGTGGTTTTGGCGTCGGACCTCGGAATCGATGCGCGACCCTTCCTCGAACATCAACAGCAGCAAGAAGAAGATAATTGGTACGACTGTTCTCAAAATCTCTTCCCCGACGAAGATTTCTCCGATCTCGATCAGTTGCAATTCCTCCGCCTCCAAGGCACCGATAAAAACTCCAATCGCATTCTCCGCATCGTCGGCAAGTACTTCCCAGCAACTGTTGTGAGTGCAGAGCGACTGAAAAGATATGTGTTTCACAAGATCTGCAGTGAGTTGCCGGATGAGCCATTCTGTATTGTTTACGTGCACACCACCGTTCAGAAAGAGGATAATTCCCCTGGCATAACGATCTTAAGGTGGATTTATGAAGAACTTCCTGCTGATTTCAAGGACAGGCTTCAAACTGTGTATTTCATCCACCCTGGCCTTCGGTCCCGGCTAGTCATCGCTGCTGTTGGCCGCTTTTTCTTGAGTGGAGGA 504 0.4921 MGDSSEDFSVVVLASDLGIDARPFLEHQQQQEEDNWYDCSQNLFPDEDFSDLDQLQFLRLQGTDKNSNRILRIVGKYFPATVVSAERLKRYVFHKICSELPDEPFCIVYVHTTVQKEDNSPGITILRWIYEELPADFKDRLQTVYFIHPGLRSRLVIAAVGRFFLSGG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1293 168 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 3 168 - -
Pvu1g1293 168 Gene3D - 46 167 IPR036865 -
Pvu1g1293 168 Pfam Divergent CRAL/TRIO domain 68 166 IPR001251 -
Pvu1g1293 168 CDD SEC14 46 166 IPR001251 -
Pvu1g1293 168 PANTHER OS01G0948300 PROTEIN 3 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1293 Pvu-Chr1 35089046 35090825 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1293 - - pvu:PHAVU_001G1245001 345.895