Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1292 ATGATTGCTATGGATACTTTGCTCAAAACACCTAACAAGCTCGAGTTTTTGCACCCACTTCACGGTTATTCAGAGAAATTAAGCAGTTCAGGCTCCTCTAGGGTGCAAAATCAGGATTTTAGATTTGGTTCTAAGAAATCGCTTGTGAGATGGGGTAAATGTGGTGGTTTGCGGGCTAGTTGTAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTCTGTATGATTCGTCAAAGGGGGCTGTGGTGGACCTTGCTGTTGTGGGAGGGGGGCCTGCGGGGCTTGCAGTTGCGCAGCAGGTTTCTGAGGCAGGGCTTTCAGTTTGTGCTATTGATCCAAACCCTAGGTTGATTTGGCCCAATAATTATGGGGTTTGGGTGGATGAGTTTGAGGCCATGGATTTGCTGGACTGCCTTGACACCACCTGGTCTGGCGCAGTTGTCTACATCGACGATAAAACAAAGAAGGATCTTGATAGGCCTTATGGTAGAGTGAATAGGAAGCTGCTGAAGTCGAAGATGATGCAGAAATGTATCTCAAATGGTGTCAAGTTTCACCAGGCCAAAGTTATCAAGATTATTCACGAGGATACCAAATCTTTGCTGATTTGTAATGATGGTGTCACTGTTCAGGCCACAGTTGTTCTTGATGCCACTGGCTTTTCAAGATGCTTGGTTCAGTATGATAAACCGTACAACCCGGGTTACCAAGTTGCTTATGGGATTCTGGCTGAGGTTGATGAACACCCGTATGATGTAGATAAAATGCTTTTCATGGACTGGAGAGATTCTCATCTGGACAATGACAAGGAGCTGAAGCAGAGAAATAGTAGGATACCCACCTTTCTGTATGCAATGCCCTTTTCATCCACTAAGATATTTCTTGAAGAAACATCCCTTGTAGCACGGCCTGGATTACGAATGGAAGATATACAGGAAAGAATGGTTGCCAGGTTGAAACATTTGGGTATTAGAGTGAAAAGTATAGAAGAAGATGAGCACTGTGTGATTCCCATGGGTGGCCCCCTCCCAGTTCTTCCCCAAAGAGTTGTTGGCATTGGCGGTACCGCTGGGATGGTGCATCCTTCAACTGGGTATATGGTTGCAAGGACCCTGGCTGCAGCTCCTATTGTTGCTAATGCTATTGTTCAGAGCCTGGGCTCTGATAGAGGACTTTCCGGAGGAGATATATCTGCACAAGTGTGGAAAGATTTATGGCCCATCCAAAGGCGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAGCTTGATTTACCTGGCACAAGGAGATTTTTTGATGCGTTTTTCGATCTGGAACCGCATTACTGGCATGGATTCTTATCATCAAGACTGTTTCTTCCTGAGCTCTTATTTTTTGGACTGTCTTTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCGAAGGGAACACTTCCCTTGGCAAACATGATCAGCAACTTGGTAAAAGATACAGAATAA 1524 0.4455 MIAMDTLLKTPNKLEFLHPLHGYSEKLSSSGSSRVQNQDFRFGSKKSLVRWGKCGGLRASCSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMMQKCISNGVKFHQAKVIKIIHEDTKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPYDVDKMLFMDWRDSHLDNDKELKQRNSRIPTFLYAMPFSSTKIFLEETSLVARPGLRMEDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQSLGSDRGLSGGDISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELLFFGLSLFSYASNTSRIEIMAKGTLPLANMISNLVKDTE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1292 507 Gene3D - 89 444 IPR036188 -
Pvu1g1292 507 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 507 - -
Pvu1g1292 507 Pfam Lycopene cyclase protein 92 484 - -
Pvu1g1292 507 SUPERFAMILY FAD/NAD(P)-binding domain 91 474 IPR036188 -
Pvu1g1292 507 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 507 - -
Pvu1g1292 507 TIGRFAM carotene-cycl: lycopene cyclase family protein 92 487 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1292 Pvu-Chr1 35085934 35087457 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1292 K06443 - gmx:100810895 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1292 1 35085934 35087457 Pvu1g1292 1 35085934 35087457 ECH