Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1287 ATGGCGCTGCACTCCGTCTCTTCCGTTCCGCACCTGCTGCGCCTCTCTGAGCCATTTCCTTCCCTCCACAACGCTCATGTCCTCCTCGACCTCGCTCCTCTCCGCCGCAAACCTAAGCGCCGCACTCGCAAATTGAAAGCGTTTCCCTCGCCCTCGCCCTCCCCGCTATCTCATTCCACCGTCAAAGCTGTTCTCCATCTTGACCGCTCCTCCTCCGACAACCGTCTCCATGCTTCGCCTGTTTCCTTTTCTTCCGATTCCAAACCGCAGGTTGCAAACTTGGAGGACATATTATCAGAGAGAGGAGCCTGTGGGGTTGGATTCATTGCCAATTTGGAGAATAAGGGATCACATGAGATTGTCAAGGATGCTTTAAATGCTTTAAGTTGCATGGAACATCGTGGTGGTTGTGGAGCTGATAATGACTCCGGTGATGGTTCAGGGCTGATGAGTGCAGTTCCATGGGATCTACTTGACAATTGGGCCAACAAGCAAGGGATTGCTTCCTTTGATAAGTTGCACACTGGTGTTGGAATGGTTTTCTTACCCAAAGATGCACAACATCTCAATGAGGCGAAGAAAGTTATCGTAAATACTTTTCAGCAAGAAGGTCTTGAGGTTCTTGGTTGGAGGCCTGTTCCTGTAAATACTTCTGTTGTAGGTTATTATGCAAAGGAGACCATGCCCAATATACAGCAGGTATTTGTTAAGATTGTGAAAGAAGAAAATGTTGATGACATTGAACGAGAACTGTACATCTGTCGGAAATTGATTGAAAAAGCAGTAAGCTCAGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCCAATCAAACCATAGTTTACAAAGGGATGCTTCGCTCAGAAGTGCTGGGGTTATTTTATTCCGATCTTCAAAATGATCTTTACAAGTCCCCTTTTGCCATTTATCATCGAAGGTACAGCACAAATACTAGTCCCAGATGGCCTCTTGCACAACCAATGAGGCTTCTTGGTCATAATGGAGAAATCAACACCATACAGGGGAACTTGAATTGGATGCAATCACGAGAACCATCATTGAAGTCACCTGTATGGAGAGGTCGTGAAAATGAAATTCGTCCTTATGGAAATCCTAAGGCATCAGACTCAGCAAATCTTGACAGTACTGCAGAGTTATTGATAAGAAGTGGAAGAAGTCCTGAGGAAGCCATGATGATTCTTGTTCCAGAGGCTTATAAAAATCATCCAACTCTGACAATCAAATATCCTGAGGCGATTGACTTCTATGACTACTACAAGGGTCAGATGGAAGCTTGGGATGGACCAGCCTTGCTTTTGTTCAGTGATGGGAAAACAGTTGGTGCATGCCTTGATCGAAATGGACTTAGACCTGCAAGGTATTGGCGAACATCAGACAATATGGTCTATGTTGCCTCTGAGGTTGGTGTTGTGCCAGTGGATGAATCAAAGGTTATCTTGAAAGGCCGCTTAGGTCCAGGCATGATGATAACGGTTGATTTACCTGGTGGTCAGGTCTATGAGAATATGGAGGTTAAAAAACGAGTAGCCTTATCAAAACCATATGGGAACTGGGTCAAGGAAAATTTGCGGTCTTTGAAGCCTGGGAACTTCCTTTCAACCTCTGTGATGGACAATGAGGCAGTATTAAGAAACCAACAGGCATTTGGCTACTCTAGTGAAGATGTCCAGATGGTGATTGAAAGTATGGCTTCTCAAGGAAAGGAGCCCACATTTTGCATGGGAGATGATATTCCACTGGCAGCATTGTCTCAGAAACCTCACATGCTTTTTGATTATTTCAAGCAACGGTTTGCACAGGTTACGAATCCTGCAATTGATCCTCTTCGAGAAGGATTGGTTATGTCTCTTGAAGTGAATATAGGGAAGAGAGGGAATTTATTGGAAATTGGGCCAGAGAATGCTTCACAGGTTATGTTATCCAGTCCAGTATTGAATGAAGGGGAGCTTGAATCATTACTAAAAGACTCCCAATTAAAACCACAAGTATTACCTACATTTTTTGATATAACTAAGGGCATTGAAGGTTCGTTGGAGAAAGCATTAAATAAGCTTTGTGAAGCGGCAGATGAAGCTGTTAGAAATGGTTCCCAGTTGCTTGTTCTATCAGACCGTTCAGAAGCACTGGAACCAACTCATCCGGCCATTCCAATTCTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATCTTGAATGGCCTGCGAACATCAGCTTCAATTATAGCAGATACTGCCCAGTGCTTTAGCACTCATCAGTTTGCATGTTTAATAGGATATGGTGCAAGTGCTGTGTCTCCATACTTGGCATTGGAGACATGTCGGCAGTGGCGTTTGAGTAATAAAACTGTTAATCTGATGAGGAATGGAAAGATGCCGACTGTATCAATTGAACAGGCACAGAACAACTATTGCAAAGCTGTAAAAGCAGGTCTTCTTAAAATTCTTTCCAAAATGGGCATCTCATTGCTTTCAAGTTACTGTGGTGCACAAATATTTGAAGTCTATGGATTAGGAAAGGAAGTTGTTGATGTTGCATTCAGAGGAAGTGTGTCTAAAATTGGTGGATTGACTTTTGATGAGGTGGCTAGAGAGACTTTGTCTTTCTGGGTGAAGGCATTCTCTGAAGATACAGCTAAAAGGTTGGAAAATTTTGGATTTATACAGTCCAGACCAGGAGGGGAGTATCATGCAAATAACCCAGAAATGTCAAAGTTGCTTCACAAAGCTGTTCGTCACAAAAGTCAAAGTGCCTTTTCAGTTTATCAGCAATATTTGGCTAATCGACCTGTGAATGTTCTCCGTGATCTTCTTGAATTCAAGAGTGATCGTGCTCCAATTCCTGTGGGGAAGGTTGAACCTGCTTCATCAATTGTTCAACGGTTTTGCACTGGGGGCATGTCACTTGGAGCTATTTCCAGAGAAACTCATGAAGCAATTGCAATTGCCATGAACAGAATAGGTGGAAAATCAAATTCAGGGGAAGGTGGCGAGGATCCTGTTCGCTGGAAACCACTTACAGATGTTGTTGATGGTTACTCGTCAACTCTTCCACACCTTAAAGGTCTTCAAAATGGGGATACTGCTACCAGTGCCATAAAGCAGGTTGCTTCAGGAAGGTTTGGTGTCACGCCAACATTCTTGGCAAATGCTGATCAGTTAGAAATCAAGATTGCACAAGGTGCAAAACCCGGTGAAGGTGGACAATTGCCTGGAAAAAAAGTTAGCATGTATATTGCTAGGTTGAGAAATTCTAAACCCGGAGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATTGAGGACCTTGCTCAATTGATCTTTGATCTTCATCAGGTGAATCCAAAGGCAAAGGTGTCCGTTAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCTGGAGTTGCGAAGGGGAATGCTGACATTATACAGATTTCAGGACATGATGGGGGAACTGGAGCAAGTCCTATAAGTTCCATCAAGCATGCTGGAGGTCCTTGGGAACTTGGTCTTACAGAATCTCACCAGACACTGATTGAAAATGGACTTAGAGAAAGGGTTATTCTCAGAGTTGATGGTGGATTTAGAAGTGGAGTTGATGTCATGATGGCCGCAATAATGGGTGCTGATGAATATGGGTTTGGTTCAGTGGCAATGATTGCTACTGGATGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGTGTTGCCAGTCAGAGGGAAGAGTTGCGGGCACGCTTTCCTGGTGTTCCTGGTGATCTTGTCAACTACTTTTTGTATGTAGCTGAGGAGCTAAGAGGCATATTGGCACAACTGGGTTATGAGAAGTTGGATGATGTTATTGGCCGGACTGATTTGTTGCAACCAAGAGACATATCTCTAGCAAAAACTCAGCATCTGGATCTGAGTTATATCCTCTCTAGTGCTGGGTTATCTAAATGGAGCAGTACAGAAATTAGGAACCAGGAGCCTCATACCAATGGTCCTGTACTGGATGATGGTTTGCTAGCAGACCCAGAGATTGCAGATGCCATTGAAAATGAAAAGGTGGTTAGTAAGACCGTAAAAATATATAACATTGATCGTGCTGTTTGTGGACGTATAGCTGGTGTCATCGCAAAGAAGTATGGTGACACCGGTTTTGCTGGACAATTGAATATAACATTTACGGGAAGTGCTGGGCAGTCATTTGCTTGCTTTCTGACACCTGGAATGAACATTCGCTTGGTAGGAGAGGCTAATGATTATGTTGGGAAGGGCATTGCTGGAGGTGAATTGGTTATCACTCCAGTTGACAAGACGGGGTTTCAACCTGAGGATGCAGCTATTGTAGGGAATACTTGCTTGTATGGGGCAACTGGTGGACAGGTCTTCGTTAGAGGGAGAGCTGGGGAAAGATTTGCCGTCAGAAACTCACTTGCTGAAGCTGTGGTTGAAGGCACGGGAGATCATTGTTGTGAGTACATGACAGGTGGCTGTGTGGTTGTCTTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACTGGAGGATTGGCTTACATTCTTGATGAGGACGATACTCTCATTCCCAAGGTAAACAGAGAAATTGTAAAAATCCAACGGGTATCAGCCCCTGTGGGGCAGATGCAACTGAAGAGCCTGATTGAATCTCATGTTGAAAAAACCGGTAGTACCAAAGGTGCGACTATTCTGAAGGATTGGGATAAGTATTTATCACTATTTTGGCAGCTGGTTCCACCTAGTGAAGAGGATACCCCTGAGGCAAATCCCAAGTATGACACAAGTAGCGCAGAGCAGATCAGTTTTCAGTCTGCTTAG 4863 0.4394 MALHSVSSVPHLLRLSEPFPSLHNAHVLLDLAPLRRKPKRRTRKLKAFPSPSPSPLSHSTVKAVLHLDRSSSDNRLHASPVSFSSDSKPQVANLEDILSERGACGVGFIANLENKGSHEIVKDALNALSCMEHRGGCGADNDSGDGSGLMSAVPWDLLDNWANKQGIASFDKLHTGVGMVFLPKDAQHLNEAKKVIVNTFQQEGLEVLGWRPVPVNTSVVGYYAKETMPNIQQVFVKIVKEENVDDIERELYICRKLIEKAVSSESWGNELYFCSLSNQTIVYKGMLRSEVLGLFYSDLQNDLYKSPFAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQGNLNWMQSREPSLKSPVWRGRENEIRPYGNPKASDSANLDSTAELLIRSGRSPEEAMMILVPEAYKNHPTLTIKYPEAIDFYDYYKGQMEAWDGPALLLFSDGKTVGACLDRNGLRPARYWRTSDNMVYVASEVGVVPVDESKVILKGRLGPGMMITVDLPGGQVYENMEVKKRVALSKPYGNWVKENLRSLKPGNFLSTSVMDNEAVLRNQQAFGYSSEDVQMVIESMASQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNLLEIGPENASQVMLSSPVLNEGELESLLKDSQLKPQVLPTFFDITKGIEGSLEKALNKLCEAADEAVRNGSQLLVLSDRSEALEPTHPAIPILLAVGTVHQHLILNGLRTSASIIADTAQCFSTHQFACLIGYGASAVSPYLALETCRQWRLSNKTVNLMRNGKMPTVSIEQAQNNYCKAVKAGLLKILSKMGISLLSSYCGAQIFEVYGLGKEVVDVAFRGSVSKIGGLTFDEVARETLSFWVKAFSEDTAKRLENFGFIQSRPGGEYHANNPEMSKLLHKAVRHKSQSAFSVYQQYLANRPVNVLRDLLEFKSDRAPIPVGKVEPASSIVQRFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPVRWKPLTDVVDGYSSTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLIENGLRERVILRVDGGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEELRGILAQLGYEKLDDVIGRTDLLQPRDISLAKTQHLDLSYILSSAGLSKWSSTEIRNQEPHTNGPVLDDGLLADPEIADAIENEKVVSKTVKIYNIDRAVCGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFACFLTPGMNIRLVGEANDYVGKGIAGGELVITPVDKTGFQPEDAAIVGNTCLYGATGGQVFVRGRAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNREIVKIQRVSAPVGQMQLKSLIESHVEKTGSTKGATILKDWDKYLSLFWQLVPPSEEDTPEANPKYDTSSAEQISFQSA* 1621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1287 1620 Pfam GXGXG motif 1370 1552 IPR002489 GO:0016491
Pvu1g1287 1620 Gene3D Aldolase class I 578 1304 IPR013785 -
Pvu1g1287 1620 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1338 1601 IPR036485 GO:0016491
Pvu1g1287 1620 CDD GltS 104 521 - -
Pvu1g1287 1620 Gene3D Aldolase class I 530 896 IPR013785 -
Pvu1g1287 1620 MobiDBLite consensus disorder prediction 1596 1620 - -
Pvu1g1287 1620 MobiDBLite consensus disorder prediction 1605 1620 - -
Pvu1g1287 1620 Pfam Glutamate synthase central domain 553 845 IPR006982 GO:0006807|GO:0015930
Pvu1g1287 1620 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 104 503 IPR017932 -
Pvu1g1287 1620 Pfam Conserved region in glutamate synthase 904 1288 IPR002932 GO:0006537|GO:0015930|GO:0016638
Pvu1g1287 1620 CDD gltB_C 1345 1595 IPR002489 GO:0016491
Pvu1g1287 1620 SUPERFAMILY FMN-linked oxidoreductases 547 1324 - -
Pvu1g1287 1620 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 104 530 IPR029055 -
Pvu1g1287 1620 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 78 1619 - -
Pvu1g1287 1620 Pfam Glutamine amidotransferases class-II 104 526 IPR017932 -
Pvu1g1287 1620 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 78 1619 - -
Pvu1g1287 1620 CDD GltS_FMN 907 1302 IPR002932 GO:0006537|GO:0015930|GO:0016638
Pvu1g1287 1620 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 104 640 IPR029055 -
Pvu1g1287 1620 Gene3D - 1325 1601 IPR036485 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1287 Pvu-Chr1 34828173 34857639 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1287 K00284 - gmx:548016 3067.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1287 1 34828173 34857639 Pvu1g1287 1 34828173 34857639 ECH