Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1286 ATGATTGGAAAAGATAGCGGTGTCATGAAGGCATGGGAGGCAACGATGAGAAAGACACATGCAGTTGCCAAGAAGCGTGCTAACAGTATATTTGGGACGATATCCTTGACACAAGTTACGGAAGAAGAAGATAACCAGGATGATTATGATGACCAAGAAGAGAATGGGAACGAGGTATATGAGGTATACCTTGAAGAGAAGAAACTACCTAATGGGGATTACTATACGGGGGAATGGGCAAATAACTTCCCACACGGGCTAGGGAAATACCTGTGGACCGATGGGTGCATGTACGTTGGAGATTGGTTCAAAGGGAAGACAAAGGGAAAGGGTAGGTTCAGTTGGCCTTCAGGGGCCACGTATGAAGGGGAGTTCAAGAGTGGTTTCATGGATGGGACAGGGACTTACACAGGGTGTAGTGGGGAGACTTATAAGGGGCAGTGGGAACTGAACTTGAAACATGGTCATGGTTTTAAGAGTTATGCCAATGGGGATTGGTTTGATGGAGAGTGGAAGAGGGATTTGCAAGATGGGGAGGGGAGGTATGAGTGGAAGGATGAGAGCCATTATGTGGGGGAATGGAGGAATGGGAGTATTTGGGGTAAAGGGTCATTTGTTTGGGCTAATGGGAATGTGTTTGAAGGGGTTTGGGAAGATGGTTGGCCAAAGGGGAATGGGACTTTCAAGTGGCCAAATGGAAGTTTTTATGAGGGAAATTTCAGCAAGGATGGGAAGGATCAGAATGGGACATACCATCCATGTGAGTCAGCAGAGGGGGAGGGGCATAGTGAGTGGGATCCTCAAGAGTTGTATAGTGAGTTGAGTGGGTATTTGGTTTGCCCTGCAGAGAAGGTTCAGGTTATGCCATCACAGAAGAGGCTTGCAGTTTGGAGGTCTACAAAGGCAGGGGAGAGTGCTAAAAATAGGAGAATGTCAGTGGATGGAAGGGTAAGTATTGGCTTGGAGAGACCACCTGATAGGTTGCAAATATGGGATGGTGGGGAAAGTGATGCAAGTAGTGCTAAAACTCCAACCATGGGGAGTGATCTGGAGGAAGACTTGACGGCTTTACGTGTAGATGATGCTGCCGAAAATTTGGGTCAACTCCAACCTCTCAAAGCACCCAAGAAGGCAAAGAGGCAGGGAGAGACCATTTGCAAAGGACACAAAAATTATGAGCTCATGCTCAATTTGCAGCTCGGAATCAGGCATTCTGTTGCAAGGCCTGCTCCCACAGCATCACTTGATCTGAAGCCTTCAGCTTTTGATCCTAAGGAGAAAGTGTGGACAAGATTTCCACCCGAAGGATCCAAATATACTCCACCACATCCATCTTGTGATTTTAAGTGGAAGGACTATTGCCCGGTAGTTTTTAGAACTCTTAGGAAGCTATTCATGGTGGATCCAGCTGATTACATGTTATCCTTATGTGGAAATGATGCCCTTCGTGAACTTTCCTCTCCTGGAAAAAGTGGCAGCTTCTTTTACTTGACCAATGACGACCGTTACATGATTAAGACAATGAAGAAAGCTGAAGTGAAAGTTCTATTGAGACTGCTTCCAGCCTATTACAATCACTTTCGAGACCACAAAAATACTCTTTTGACAAAGTATTATGGCCTGCATTGTGTGAAGTTAAATGGACCTATTCAGAAGAAGGTTCGTTTTATCATAATGGGCAACCTCTTCCGTTCTGAGTTTATCACCCATAGACGCTACGATTTAAAGGGTTCTTCACTTGGACGCACCTCAGATAAGCCTGAGACAGAAATTAGTGAAACCACTATACTTAAGGATCTTGATCTTAATTTCCTATTTCAACTGGAGAAGTCCCAATTTGAAGATTTTTGCAGACAAGTTGATATGGACTGTGAGATTCTGGAACAGGAGGGAATTATGGACTATAGTCTTCTAGTGGGCATTTTTTTCAAAGATATTTCGCCAGACGGGGAAATTATTCCTATACAATCTCGAACGCCTGTTGGTGATTTAGAAAAAGAAGGAACTCCCCATACCTCAAGTGAAGACACAGATCAACCTCCTTCTGATCTTTCTAGTGTGATATTGGGTATGAATATGCCAGCAAAGGTTGAAAGGACGGTGAGAAGAAGTGGTTGCGAATTACAGCTTATAGGAGAACCAATTGGAGAATTCTATAATGTGGCGTTGACTTTTGGTATCATAGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCATGCCTACAAATCCATTCAATATGACCCAACTTCAATATCAGCCGTTGATCCTATACAATATTCAAGGCGTTTTCGTGATTTCATACTCAGAGTATTCACTGAAAACTCTTGA 2337 0.4382 MIGKDSGVMKAWEATMRKTHAVAKKRANSIFGTISLTQVTEEEDNQDDYDDQEENGNEVYEVYLEEKKLPNGDYYTGEWANNFPHGLGKYLWTDGCMYVGDWFKGKTKGKGRFSWPSGATYEGEFKSGFMDGTGTYTGCSGETYKGQWELNLKHGHGFKSYANGDWFDGEWKRDLQDGEGRYEWKDESHYVGEWRNGSIWGKGSFVWANGNVFEGVWEDGWPKGNGTFKWPNGSFYEGNFSKDGKDQNGTYHPCESAEGEGHSEWDPQELYSELSGYLVCPAEKVQVMPSQKRLAVWRSTKAGESAKNRRMSVDGRVSIGLERPPDRLQIWDGGESDASSAKTPTMGSDLEEDLTALRVDDAAENLGQLQPLKAPKKAKRQGETICKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFMVDPADYMLSLCGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLLRLLPAYYNHFRDHKNTLLTKYYGLHCVKLNGPIQKKVRFIIMGNLFRSEFITHRRYDLKGSSLGRTSDKPETEISETTILKDLDLNFLFQLEKSQFEDFCRQVDMDCEILEQEGIMDYSLLVGIFFKDISPDGEIIPIQSRTPVGDLEKEGTPHTSSEDTDQPPSDLSSVILGMNMPAKVERTVRRSGCELQLIGEPIGEFYNVALTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPIQYSRRFRDFILRVFTENS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1286 778 SMART PIPK_2 418 775 IPR002498 GO:0016307|GO:0046488
Pvu1g1286 778 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 17 777 - -
Pvu1g1286 778 CDD PIPKc_AtPIP5K_like 391 773 - -
Pvu1g1286 778 MobiDBLite consensus disorder prediction 326 347 - -
Pvu1g1286 778 Pfam MORN repeat 121 142 IPR003409 -
Pvu1g1286 778 Pfam MORN repeat 144 165 IPR003409 -
Pvu1g1286 778 Pfam MORN repeat 98 119 IPR003409 -
Pvu1g1286 778 Pfam MORN repeat 75 97 IPR003409 -
Pvu1g1286 778 Pfam MORN repeat 190 212 IPR003409 -
Pvu1g1286 778 Pfam MORN repeat 213 234 IPR003409 -
Pvu1g1286 778 Pfam MORN repeat 167 186 IPR003409 -
Pvu1g1286 778 Gene3D - 48 104 - -
Pvu1g1286 778 Gene3D - 105 149 - -
Pvu1g1286 778 Gene3D - 150 200 - -
Pvu1g1286 778 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 161 252 - -
Pvu1g1286 778 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 477 771 IPR002498 GO:0016307|GO:0046488
Pvu1g1286 778 PIRSF PIP5K_plant 10 778 IPR017163 GO:0005524|GO:0016308
Pvu1g1286 778 SUPERFAMILY SAICAR synthase-like 387 774 - -
Pvu1g1286 778 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 17 777 IPR023610 -
Pvu1g1286 778 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 377 561 IPR027484 -
Pvu1g1286 778 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 70 174 - -
Pvu1g1286 778 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 388 774 IPR002498 GO:0016307|GO:0046488
Pvu1g1286 778 MobiDBLite consensus disorder prediction 654 685 - -
Pvu1g1286 778 SMART morn 96 117 IPR003409 -
Pvu1g1286 778 SMART morn 119 140 IPR003409 -
Pvu1g1286 778 SMART morn 165 186 IPR003409 -
Pvu1g1286 778 SMART morn 142 163 IPR003409 -
Pvu1g1286 778 SMART morn 73 94 IPR003409 -
Pvu1g1286 778 SMART morn 211 232 IPR003409 -
Pvu1g1286 778 SMART morn 234 255 IPR003409 -
Pvu1g1286 778 SMART morn 188 209 IPR003409 -
Pvu1g1286 778 Gene3D - 562 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1286 Pvu-Chr1 34799670 34804838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1286 1 778 Acyl Lipid Metabolism Gene Families AT3G56960 62.803 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1286 K00889 - gmx:100808754 1458.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1286 1 34799670 34804838 Pvu1g1286 1 34799670 34804838 ECH