LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g1280	ATGGCGAGCACCCACATTGGGAATGCCGGAGAACCCGACGCTAAGTCCTTCAAGCCTCGCCCCAAGAAACCCTCCGACGACTTCATCACGCTCTTTCACGGCTCCGATCCGGTTCGCGTTGAGCTCACGCGCCTCCAGAATGAACTCCGAGAGAAGGATAGGGAGCTTGGGGATGCACTTGCGGAAATTAAGTCATTGAGGAATTCGGAGCGTCTTAAGGAAAAGGGGGTTGAAGAGCTGACAGATGAGCTGAACAAGGTGGATGAAAAGCTAAAAGCTGCTGAAGTTCTTCTGGAAAGTAAGAACCTTGAAACAAAAAAAATCAATGAAGAGAAGAGGGCAGCACTGGCTGCACAATTTGCTGCAGAAGCCACACTTCGAAGAGTGCATGCTGCACAGAAAGATGATGAAATGCCTCCTATTGAAGCTATTATTGCGCCCCTGGAGGCAGAGTTGAAGCTTGCTAGGATGGAGGTGGCAAAGCTGCAGGATGACAACAGAGCACTTGATCGGCTAACCAAATCAAAGGAGGCTGCACTTCTTGAGGCTGAGAGAACGGTTCAGATTGCTTTGGCAAAAGCATCCTTGGTTGATGATCTGCAAAACAAAAATCAAGAGCTAATGAAACAGATTGAAATATGCCAGGAGGAGGGCAAAATCTTGGACAAAATGCTTAGGCAAAAGGTTGCTGAAGTTGAAAAGCTAACCCAAACTGTTCGGGAGCTTGAAGAGGCAGTCTTGGCTGGTGGGGCTGCTGCTAATGCTGTCCGTGATTACCGGCGTAGAGTGCAAGAGATGAATGGGGAAAGGAAAATTTTAGAGCGGGAAGTAGCTCGTGCCAAAGTTACTGCAAACAGGGTTGCGACTGTAGTTGCAAATGAGTGGAAAGATGCTAATGATAAAGTGATGCCTGTGAAGCAGTGGCTAGAAGAAAGAAAATTTTTCCAGGGTGAAATGCAACAATTACGTGATAAATTGGCTATAGCTGAGCGTACTGCAAAAGCAGAGGCACAAATGAAGGAAAAATATCAATTGCGCTTCAAAGTTTTGGAAGAAAGGGTTAAGACATCTAATGGTAATTCCAAATTCACTGTATCAGATGGAAGAAACATTGCCACTGGGCCTTCACGGAGACAATCTTTTGGTGGAGCTGAGAGTATCTCTTCATCTTCTTCCAATGGATATCTATCGAGGAAAACCTCAATTTCAAGATCAGGGTCTCTAAGATCAAATAGTGCTAATGTGTTACTAAAAAATGCCAAACTTTCATCTAGATCGTATGATGGTGGTAGTAGAAACCTGGAGAGAGAGAGGCCAACCTCTGATGCAAATCGGGTAGATAACATGCCAACAAACACCAATAATCAGACCATCACCAGTGAGACTATTACTACACATAAGGAGAGCGCAAATGGCATTCCGGTAAAAAAATCTAAAGCAGAAAATGAAGACTGTGTTTCAGGAATGCTGTATGACATGTTGCAAAAAGAGGTTATATCTCTTAGGAAAGCTTGTCATGAAAAGGACCAGACTCTTAAAGATAAGGATGATGCCATAGAGATGTTGGCAAAAAAGGTTGATACATTGAACAAAGCTATGGAAGTTGAGGCCAGAAAAATGCGTAGGGAAGTTGCTTCTATGGAGAAGGAGGTTGCCGCAATGCGGATAAGCAAGGAACATAATCATAGGGCACGATCAAGTGCTCCTAGAGCGGCTGTAAATTCCCAGACAATTTCTACCAGGAGTGCACGTAACTTTTAA	1761	0.4441	MASTHIGNAGEPDAKSFKPRPKKPSDDFITLFHGSDPVRVELTRLQNELREKDRELGDALAEIKSLRNSERLKEKGVEELTDELNKVDEKLKAAEVLLESKNLETKKINEEKRAALAAQFAAEATLRRVHAAQKDDEMPPIEAIIAPLEAELKLARMEVAKLQDDNRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEEGKILDKMLRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYRRRVQEMNGERKILEREVARAKVTANRVATVVANEWKDANDKVMPVKQWLEERKFFQGEMQQLRDKLAIAERTAKAEAQMKEKYQLRFKVLEERVKTSNGNSKFTVSDGRNIATGPSRRQSFGGAESISSSSSNGYLSRKTSISRSGSLRSNSANVLLKNAKLSSRSYDGGSRNLERERPTSDANRVDNMPTNTNNQTITSETITTHKESANGIPVKKSKAENEDCVSGMLYDMLQKEVISLRKACHEKDQTLKDKDDAIEMLAKKVDTLNKAMEVEARKMRREVASMEKEVAAMRISKEHNHRARSSAPRAAVNSQTISTRSARNF*	587

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu1g1280	586	Coils	Coil	145	172	-	-
	Pvu1g1280	586	Coils	Coil	305	339	-	-
	Pvu1g1280	586	MobiDBLite	consensus disorder prediction	424	456	-	-
	Pvu1g1280	586	Coils	Coil	512	557	-	-
	Pvu1g1280	586	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN 70-2	24	581	IPR009768	GO:0007010\|GO:0008017
	Pvu1g1280	586	Pfam	Microtubule-associated protein 70	26	576	IPR009768	GO:0007010\|GO:0008017
	Pvu1g1280	586	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN 70-1-LIKE	24	581	-	-
	Pvu1g1280	586	MobiDBLite	consensus disorder prediction	568	586	-	-
	Pvu1g1280	586	MobiDBLite	consensus disorder prediction	1	31	-	-
	Pvu1g1280	586	MobiDBLite	consensus disorder prediction	15	29	-	-
	Pvu1g1280	586	Coils	Coil	42	69	-	-
	Pvu1g1280	586	MobiDBLite	consensus disorder prediction	358	408	-	-
	Pvu1g1280	586	Coils	Coil	77	111	-	-
	Pvu1g1280	586	Coils	Coil	197	217	-	-
	Pvu1g1280	586	Coils	Coil	225	245	-	-
	Pvu1g1280	586	Coils	Coil	256	283	-	-
	Pvu1g1280	586	MobiDBLite	consensus disorder prediction	558	586	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g1280	Pvu-Chr1	34587081	34591895	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g1280	-		-	gmx:100814485	989.949

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g1280	1	34587081	34591895	Pvu1g1280	1	34587081	34591895	ECH