Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1278 ATGGTTTGCAATCACCAAACCATTGAGGATATTAGGATTATTGAGGATATTGGGGTGATCAATAGTCAATTTGATCATCATTTGGAATGTGAAGTGCCAGATTCTCCTTCTGTGTATCGAAGGTTGGAAAAGAAAACTGATGCACAAGAGATTCAGCTTCCTACTTTGATGATCACAGGAAGGCTTTTCAATATGACTAAGAAGAGTAAAAGGTTTCAAAGGCATGGCATTAAAGCAACTATGCAGTTTGAGGCAAAAGGACCTTCTGTGTATGCAAGGTATTGGATTTTGTTCAATCAGAAAACAAAGCATGAGGTTGGGTTTCAGGTGAAGATTGAGAAACCTAACTTCACCTCCCGCAACCAAGTCTCTGAAACAGTTTCAAGAGGGTACCAGGGCTTCAAGAGGAGCCGGAGTAATAGGAAAAAGAGACTGGGTTGGTGTTGGTACCTTTCTAGACCAAGAGGGTTTCTGCTAGTCTCTTCAGTGGAGGAAGAGATAGGAGACTTGGATATCCCAAAACCAGAAGAGTTCAATAGAGTGTGGTTGACATATGCAAGTGATGAGAAGGAGAGGTTTTACGGCTTTGGGGAGCAGTTTTCTCACATGAACTTCAAAGGCAAAAGGGTGCCCATATTTGTTCAAGAACAAGGTATTGGAAGAGGAGATCAACCCATAACCCTGGCTGCTAACTTGGTTAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTCTACATAACGTCAAGAATGAGGTCTGTCTGCCTTGAAGGATATGATTATACAGTTTTCGATCTTACTAGACTTGACAGAGTACAGATACAGATACATGGAAACTCAGCTGAAGGGCGGATATTGCATGGAAACTCACCTTGTGAACTGATTGAACGTTTCACAGAAAGCATCGGAAGGTTACCAGAGCTTCCTGAATGGATTATATCTGGTGCTATAGTTGGAATGCAAGGTGGCACAGATGCTGTACGTCATATCTGGGATGAACTAAGGACTTATGATGTTCCTATCTCGGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAAAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATTCACAAAGGTATTGGGGATGGAGGAATTGGGAAGTGGATTCACAAAGGTATTGGGGATGGAAGGAACTTATTGAAGATCTTAGCTCTCAGAATATAAAAGTTATGACATATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAGCAAAACAAAAGGAGAAACCTCTTTGAGGAGGCAAAACAGTTGGACATATTGGTAAAAGACGGCAATGGAAATCCATACATGGTTCCAAACACGGCTTTTGATGTAGGAATGCTAGATCTGACGCACCCAAAATCTGCAACTTGGTTCAAGCAGATTCTTGGAGACATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCTCATAACAGATACCCGGAACTATGGGCCAAAATTAACAGAGAGATTGTAGAAGAATGGAAAAGTAAACCCTTGGACAAGGTGAAGAAAGACCAAGAGGAGGGTTTGGTTTTCTTCATGAGAGCTGGTTTTAGAGACAGCCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAAGAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTACTGAGCAGTGGAATTTCTGGCTATGCATTTAATCACAGTGACATTGGAGGATACTGTACAGTAAACTTGCCTATAGTTAAATATAATAGAAGTGAAGAATTGCTTTTGCGGTGGATGGAGCTAAATTCTTTTACCATAGTCTTCCGTACCCATGAAGGAAACAAACCATCATGCAACAGCCAGTTTTACTCAAACCAGCAAACAATGTCACACTTTGCACGTTTTGCAAAAGTATACAAAGCATGGAAATTTTATCGAATTCAGCTGGTGAAGGAAGCTGCTCAGAAAGGATTGCCTGTATGTCGCCATCTATTTCTTCATTATCCAAATGATGAACGTGTGCAAAATTTGAGTTATCAGCAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTGCCTGTTCTTGACAAAGGAAAGAAAAAAGTTAAAGCATATTTTCCATTGGGGGAGAGTAGCAGTTGGGTTCATATCTGGACAGGAAAAGTATTTTCCAAAGAAGGAAGTGAAGAATGGGTAGAAGCTCCAATAGGATATCCTGCTGTATTTCTTAAAGTTGGCTCTCTCATTGGAGAAACCTTTTTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2358 0.4148 MVCNHQTIEDIRIIEDIGVINSQFDHHLECEVPDSPSVYRRLEKKTDAQEIQLPTLMITGRLFNMTKKSKRFQRHGIKATMQFEAKGPSVYARYWILFNQKTKHEVGFQVKIEKPNFTSRNQVSETVSRGYQGFKRSRSNRKKRLGWCWYLSRPRGFLLVSSVEEEIGDLDIPKPEEFNRVWLTYASDEKERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPFYITSRMRSVCLEGYDYTVFDLTRLDRVQIQIHGNSAEGRILHGNSPCELIERFTESIGRLPELPEWIISGAIVGMQGGTDAVRHIWDELRTYDVPISAFWLQDWVGQRKTLIGSQLWWNWEVDSQRYWGWRNWEVDSQRYWGWKELIEDLSSQNIKVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDGNGNPYMVPNTAFDVGMLDLTHPKSATWFKQILGDMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINREIVEEWKSKPLDKVKKDQEEGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQRNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYNRSEELLLRWMELNSFTIVFRTHEGNKPSCNSQFYSNQQTMSHFARFAKVYKAWKFYRIQLVKEAAQKGLPVCRHLFLHYPNDERVQNLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWVHIWTGKVFSKEGSEEWVEAPIGYPAVFLKVGSLIGETFLNNLRSLGIL* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1278 785 CDD GH31_glucosidase_YihQ 308 659 IPR044112 -
Pvu1g1278 785 Gene3D Glycosidases 295 713 - -
Pvu1g1278 785 CDD GH31_N 178 308 - -
Pvu1g1278 785 Gene3D - 714 766 IPR013780 -
Pvu1g1278 785 SUPERFAMILY Glycosyl hydrolase domain 682 766 - -
Pvu1g1278 785 SUPERFAMILY Galactose mutarotase-like 177 296 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu1g1278 785 SUPERFAMILY (Trans)glycosidases 299 680 IPR017853 -
Pvu1g1278 785 Coils Coil 418 438 - -
Pvu1g1278 785 Gene3D glycosyl hydrolase (family 31) 139 292 - -
Pvu1g1278 785 PANTHER SULFOQUINOVOSIDASE 2 382 - -
Pvu1g1278 785 PANTHER SULFOQUINOVOSIDASE 380 783 - -
Pvu1g1278 785 Pfam Glycosyl hydrolases family 31 291 771 IPR000322 GO:0004553|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1278 193 771 Glycoside Hydrolase AT3G45940 23.491 4.99e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1278 - - pvu:PHAVU_001G123000g 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1278 1 34548068 34552751 Pvu1g1278 1 34548068 34552751 ECH