Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1273 ATGTGGAAAGTCTTTCGGAGGTGGGGACGGGTTCTGGACGTGTTCATTTCTAGAAAGCTTAATTCTAGAAACCGGAAGTTTGGTTTAGTTAGATTTCAAGGAGTGGAAGATATGTACGCGCTGGAAAAGAAGCTAGATGTTATATGGATCGGTACGTGGAAACTACGGGCGAATCTACCCAAATATAGTAGGTTCAAAAGGGTGTCTAAGAAGCTGGGCGAGCAACCCCATTCCACTGGGAGGTTAAGGGAGCAGGTGCAACAGAAGAAGAGGATTATGCAAACCGGCACAGTTCAGAGGAAGGGGGAGCAGGCGCAACAACAGCTGACTTTCGCAGAGGTGGTGTTGCAAATTGAGGTGAAATCTTCTTCTTGGTTAGACAACTGCTATGTCGAGCGTCTCTTAAAGGCACCAAACATGCAGTTGGTTAAAGAAAGCTTCGTCTTGGGCGGTTTCGGTTTCGTGCGTCTGAGGTACCTGGTGGAAAAGTTTGTGCTATTATCCTGTGACGAGGAAGGGCTTATTGGAAAACTCGTAGAAGAAAATAAAGAGTGGTTCGCTGGTATGTTCGTTTCGGCGACTGAGGCTAGGGAAGTGCTGGAGTATGTTCGACTACGGGTTAGTATTTCGATAGGTATTTCACTATGTGAGAAGAAGGAGGTGAGTATTAATGACTTCTCTTATTCTATTTCTTTTGAAGAAGAGACATACGAGTCAGTACTGGAGTTCGTCGTTAACTCAGAAGATGATGGTGGAAGGGAGCGTTTGGTCTCTAAGGGAAGGCGAGGAGATGACGGTTCAGTGTTTGGAGGTGCAGACAGAACCTATCCTTGTAACAAAGAATGTTCAAGAGGAGAATGGAGTGGATCGTCATGA 876 0.4578 MWKVFRRWGRVLDVFISRKLNSRNRKFGLVRFQGVEDMYALEKKLDVIWIGTWKLRANLPKYSRFKRVSKKLGEQPHSTGRLREQVQQKKRIMQTGTVQRKGEQAQQQLTFAEVVLQIEVKSSSWLDNCYVERLLKAPNMQLVKESFVLGGFGFVRLRYLVEKFVLLSCDEEGLIGKLVEENKEWFAGMFVSATEAREVLEYVRLRVSISIGISLCEKKEVSINDFSYSISFEEETYESVLEFVVNSEDDGGRERLVSKGRRGDDGSVFGGADRTYPCNKECSRGEWSGSS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1273 291 PANTHER RNA RECOGNITION MOTIF 8 186 - -
Pvu1g1273 291 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 8 186 - -
Pvu1g1273 291 CDD RRM_SF 3 58 - -
Pvu1g1273 291 SUPERFAMILY RNA-binding domain, RBD 2 59 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1273 Pvu-Chr1 34488355 34489699 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1273 - K19922 pvu:PHAVU_001G122500g 583.178