Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1269 ATGACAAGAACCCAATGTGGTGAATGGTGGAAATCAGATACTGAGGTTGTAATAAATGAAGCTTTGAAATCTGGTTTGGCACCTAATGTCTCTGATGCTCACACAATCAATGGTCATCCAGGACCTGTCCAAGGCTGTGCTTCACAAGAAGGATTTAAGTTGGATGTTCAACCAGGAAACATCTACTTGCTAAGAATCATCAATGCTGCACTCAATGAAGAGCTTTTCTTTAAAATTGCTGGTCATGAACTCACTGTTGTTGAAGTTGATGCAGTCTACACAAAACCATTCAAAACTGATACCATTGTCATAACACCCGGCCAGACCACAAATGTGCTTCTAACAACCAAACATGCAGCTGGAAAATACTTGGTTGCAGCCTCTCCTTTCATGGATGCTCCTATTGCAGTAGACAACAAGACTGCCACTGCCATATTACACTATTCAGGCACCCTTAGTTCCAGCCTCACCACCCTCACTTCCATGCCTCCCAAAAATTCCACCATTCTTGCTACCAGTTTCACTGACTCTCTCAGAAGCTTAAACTCTAAAAAGTATCCAGCCAGAGTCCCTTTGAAGATTGATAGAAACTTGCTCTTCACTGTTAGTCTTGGTATCAACCCTTGTGCTACTTGTTTGAATAATACACTAGTGCAGATA 660 0.4197 MTRTQCGEWWKSDTEVVINEALKSGLAPNVSDAHTINGHPGPVQGCASQEGFKLDVQPGNIYLLRIINAALNEELFFKIAGHELTVVEVDAVYTKPFKTDTIVITPGQTTNVLLTTKHAAGKYLVAASPFMDAPIAVDNKTATAILHYSGTLSSSLTTLTSMPPKNSTILATSFTDSLRSLNSKKYPARVPLKIDRNLLFTVSLGINPCATCLNNTLVQI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1269 220 CDD CuRO_2_LCC_plant 7 148 IPR034285 -
Pvu1g1269 220 Pfam Multicopper oxidase 7 150 IPR001117 -
Pvu1g1269 220 PANTHER LACCASE-16 7 218 - -
Pvu1g1269 220 SUPERFAMILY Cupredoxins 7 164 IPR008972 -
Pvu1g1269 220 Gene3D - 4 184 IPR008972 -
Pvu1g1269 220 PANTHER MULTI-COPPER OXIDASE 7 218 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1269 Pvu-Chr1 34436830 34437838 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1269 K05909 - pvu:PHAVU_001G122100g 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1269 1 34436830 34437838 Pvu1g1269 1 34436830 34437838 ECH