Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1268 ATGTCATCTGAGAAGAACTGTGTGTCAAAACTGGAGAAGCAAAAAGATTGCAAAGTTTATTCTCTCTTAGATTTGCCTGAGTGGACCATGGATTGCATTCTTGAGTGCCTTTCACCAATGGATTTGTTTAGAGTGGCACAAGTGTGTACCAATTTGAGGGACAAAACCAGAAATGATGCTTTGTGGGAGAAACTCATCAAGCAGAAATGGGGTAGGCTGCTTGGTGATGCTGCTTACCATGAGTGGCAGTGGCACACAACAAAATTTGCAAACACACAAAGCATCTTCTCACTTCAGCAGAATCAAACCGGATCATGTGGCTCTTTCAGTGGTGTTTGGCCTTTCCTAAACTTTCATTCTTATTTGGAAAATTTCACTGACTTGATTACTTTGTTTAAAAATTGTTCCAAAATGGCTTTGTATATCTGTCTTGAGAGTGGTCGCTTCTGGTTTCCTGTTCAACTGTATAAGGCTGCAAATCTATTATGCTATGATGCCATAGTCAGCTATGACTCTAAAAGAGACACCTTCAAAGCAAGGTGTCAAACTGGTGGGTGGCGACTGACCGAGGAAAATATTCAGTGGGATAGGTTGAGATCATCACCAGTTGAAACATCTCCAAGGGAGGTTCATATGTCTAACTGTATGAATGATTTAAAACCTGGAGATCAAATTGAGATTCAGCTGAAAAAACGCAAAGAATCCCCTTATTGTTAG 717 0.4045 MSSEKNCVSKLEKQKDCKVYSLLDLPEWTMDCILECLSPMDLFRVAQVCTNLRDKTRNDALWEKLIKQKWGRLLGDAAYHEWQWHTTKFANTQSIFSLQQNQTGSCGSFSGVWPFLNFHSYLENFTDLITLFKNCSKMALYICLESGRFWFPVQLYKAANLLCYDAIVSYDSKRDTFKARCQTGGWRLTEENIQWDRLRSSPVETSPREVHMSNCMNDLKPGDQIEIQLKKRKESPYC* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1268 238 Pfam F-box domain 30 64 IPR001810 GO:0005515
Pvu1g1268 238 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Pvu1g1268 238 SUPERFAMILY F-box domain 18 88 IPR036047 GO:0005515
Pvu1g1268 238 Gene3D - 6 101 - -
Pvu1g1268 238 PANTHER ESTS AU081301(E20138) 5 237 - -
Pvu1g1268 238 SMART fbox_2 25 65 IPR001810 GO:0005515
Pvu1g1268 238 PANTHER F-BOX PLANT-LIKE PROTEIN 5 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1268 Pvu-Chr1 34421588 34422961 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1268 - - pvu:PHAVU_001G122000g 508.449