Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1266 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTCACGAGGCTTTTCATCGTTGCTTCGGCTATTTTCACAATCTTCTTTGGGATCCAAGGCCGTTTCGGCACTCTGGGGTTGTCTTATCAGGATATTTTTGGAAAACTTCGCCTTTGGAAGCTGATCATGTCCATATTTTCCTTCTCATCAACACCAGAATTGATGTTTGGACTGTATCTGCTATATTATTTCAGGGTCTTTGAAAGACAGATAGGCTCCAATAAATACTCCGTGTTTATTGTGTTCTCAATATTAACTTCACTACTGCTTGAGGTCCTTGCTGTAGCACTTTTAAAAGATCCTACAGCAAACCTAGTCACTCCTGGACCATATGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTTTGACATTCCAGTTTCAACACGGTTTCGTGTGTTTAGCTTCTTCTTCTCAGACAAGTCATTCATATATCTAGCTGGTATTCAGCTTCTTTTGTCATCATGGAAAAGGTCCATCTTACCAGGAATGTGTGGCATCCTTGCTGGATCCTTGTACCGTTTGAATGTCTTCTACATCCGCAAAGCAAAGTTCCCAGAGTTTATCTCGTCATTCTTCTCACGAATTGCATTGCCATCTATGGGAAGTTCACATGCAACATCATCATCAACAACAAGGCATAGTGTTGGGAATTTACCTTCCCATCCAGCTCGCCAAGTGGAGAGAAACTACCCTGCTCCAATGCAATCTGCAGTAGAACCATCAGAAGACTCAATCACTACACTCCTCTCGATGGGCTTTGACAGAAATTCTGCCAGACAAGCCCTTGTGCAGGCCAGAAATGATGTCAATGTGGCTACCAACATTCTATTGGAGGCACAGTCCCACTAA 888 0.4291 MNGGPSGFTNAPVTRLFIVASAIFTIFFGIQGRFGTLGLSYQDIFGKLRLWKLIMSIFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLLEVLAVALLKDPTANLVTPGPYGLIFASFVPFFFDIPVSTRFRVFSFFFSDKSFIYLAGIQLLLSSWKRSILPGMCGILAGSLYRLNVFYIRKAKFPEFISSFFSRIALPSMGSSHATSSSTTRHSVGNLPSHPARQVERNYPAPMQSAVEPSEDSITTLLSMGFDRNSARQALVQARNDVNVATNILLEAQSH* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1266 295 Pfam UBA/TS-N domain 254 289 IPR015940 -
Pvu1g1266 295 SUPERFAMILY UBA-like 247 292 IPR009060 GO:0005515
Pvu1g1266 295 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Pvu1g1266 295 Gene3D - 216 294 - -
Pvu1g1266 295 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016021
Pvu1g1266 295 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 252 292 IPR015940 -
Pvu1g1266 295 MobiDBLite consensus disorder prediction 217 231 - -
Pvu1g1266 295 Gene3D - 9 189 IPR035952 -
Pvu1g1266 295 SMART uba_6 254 291 IPR015940 -
Pvu1g1266 295 MobiDBLite consensus disorder prediction 217 253 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1266 K25216 - gmx:100805217 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1266 1 34350992 34358679 Pvu1g1266 1 34350992 34358679 ECH